Evidence map›Paper›PMID 33344095›Full record

ArticleApplications in plant sciences2020

Composite modeling of leaf shape along shoots discriminates

Abigail E Bryson, Maya Wilson Brown, Joey Mullins, Wei Dong, Keivan Bahmani, Nolan Bornowski, Christina Chiu, Philip Engelgau, Bethany Gettings, Fabio Gomezcano and 26 more

Abstract read
In one paragraph

Article in Applications in plant sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

36 authors.

Abigail E BrysonGenetics Program Michigan State University East Lansing Michigan 48824 USA.
Maya Wilson BrownDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
Joey MullinsDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.
Wei DongDepartment of Biochemistry and Molecular Biology Michigan State University East Lansing Michigan 48824 USA.
Keivan BahmaniDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0001-5977-0200
Nolan BornowskiDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0003-0317-6944
Christina ChiuDepartment of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.
Philip EngelgauDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.
Bethany GettingsDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0002-2014-2634
Fabio GomezcanoDepartment of Biochemistry and Molecular Biology Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0002-2624-0112
Luke M GregoryDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
Anna C HaberDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0002-3427-1779
Donghee HohCell and Molecular Biology Program Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0002-0221-6484
Emily E JenningsDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0002-4098-5647
Zhongjie JiDepartment of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.
Prabhjot KaurDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.
Sunil K Kenchanmane RajuDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0001-8960-094X
Yunfei LongDepartment of Electrical and Computer Engineering Michigan State University East Lansing Michigan 48824 USA.
Serena G LotreckDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0001-7282-6272
Davis T MathieuGenetics Program Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0003-2184-2330
Thilanka RanaweeraDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0002-8566-4740
Eleanore J RitterDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0001-8857-3222
Rie SadoharaDepartment of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0003-2861-5288
Robert Z ShroteDepartment of Plant, Soil and Microbial Sciences Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0001-6832-2629
Kaila E SmithDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
Scott J TeresiDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0003-1356-7543
Julian VenegasDepartment of Computational Mathematics, Science, and Engineering Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0001-8389-4131
Hao WangDepartment of Computational Mathematics, Science, and Engineering Michigan State University East Lansing Michigan 48824 USA.
McKena L WilsonDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
Alyssa R TarrantDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.
Margaret H FrankSchool of Integrative Plant Science Plant Biology Section Cornell University Ithaca New York 14850 USA.ORCID https://orcid.org/0000-0002-8269-8240
Zoë MigicovskyDepartment of Plant, Food, and Environmental Sciences Faculty of Agriculture Dalhousie University Truro Nova Scotia B2N 5E3 Canada.ORCID https://orcid.org/0000-0002-3931-1258
Jyothi KumarDepartment of Plant Biology Michigan State University East Lansing Michigan 48824 USA.
Robert VanBurenDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.ORCID https://orcid.org/0000-0003-2133-2760
Jason P LondoGrape Genetics Research Unit USDA ARS Geneva New York 14456 USA.ORCID https://orcid.org/0000-0003-0535-4820
Daniel H ChitwoodDepartment of Horticulture Michigan State University East Lansing Michigan 48824 USA.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

premiseLeaf morphology is dynamic, continuously deforming during leaf expansion and among leaves within a shoot. Here, we measured the leaf morphology of more than 200 grapevines (

methodsUsing homologous universal landmarks found in grapevine leaves, we modeled various morphological features as polynomial functions of leaf nodes. The resulting functions were used to reconstruct modeled leaf shapes across the shoots, generating composite leaves that comprehensively capture the spectrum of leaf morphologies present.

resultsWe found that composite leaves are better predictors of species identity than individual leaves from the same plant. We were able to use composite leaves to predict the species identity of previously unassigned grapevines, which were verified with genotyping. DISCUSSION: Observations of individual leaf shape fail to capture the true diversity between species. Composite leaf shape-an assemblage of modeled leaf snapshots across the shoot-is a better representation of the dynamic and essential shapes of leaves, in addition to serving as a better predictor of species identity than individual leaves.

Indexed as

grapevinelandmark analysisleaf shapemodelingmorphometricsVitis

Identifiers

PMID33344095
PMCPMC7742203

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.