Evidence map›Paper›PMID 33342928›Full record

ArticleAnalytical sciences : the international journal of the Japan Society for Analytical Chemistry2021

Untargeted LC-MS Metabolomics for the Analysis of Micro-scaled Extracellular Metabolites from Hepatocytes.

Rodi Abdalkader, Romanas Chaleckis, Isabel Meister, Pei Zhang, Craig E Wheelock, Ken-Ichiro Kamei

Abstract read
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In one paragraph

Article in Analytical sciences : the international journal of the Japan Society for Analytical Chemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Article
  3. Review
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Rodi AbdalkaderInstitute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University, Yoshida-Ushinomiya-cho, Sakyo, Kyoto, 606-8501, Japan. abdalkader.rodiadeeb.3z@kyoto-u.ac.jp.
Romanas ChaleckisGunma University Initiative for Advanced Research (GIAR), Gunma University, Gunma, 371-8511, Japan.
Isabel MeisterGunma University Initiative for Advanced Research (GIAR), Gunma University, Gunma, 371-8511, Japan.
Pei ZhangGunma University Initiative for Advanced Research (GIAR), Gunma University, Gunma, 371-8511, Japan.
Craig E WheelockGunma University Initiative for Advanced Research (GIAR), Gunma University, Gunma, 371-8511, Japan.
Ken-Ichiro KameiInstitute for Integrated Cell-Material Sciences (WPI-iCeMS), Kyoto University, Yoshida-Ushinomiya-cho, Sakyo, Kyoto, 606-8501, Japan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Metabolome analysis in micro physiological models is a challenge due to the low volume of the cell culture medium (CCM). Here, we report a LC-MS-based untargeted metabolomics protocol for the detection of hepatocyte extracellular metabolites from micro-scale samples of CCM. Using a single LC-MS method we have detected 57 metabolites of which 27 showed >2-fold shifts after 72-hour incubation. We demonstrate that micro-scale CCM samples can be used for modelling micro-physiological temporal dynamics in metabolite intensities.

Indexed as

MetabolomicsTandem Mass SpectrometryChromatography, LiquidHepatocytesMetabolomeextracellular metabolitesHepatocyteLC-MS

Identifiers

What OpenQuestion holds

Textmetadata
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.