Evidence map›Paper›PMID 33341474›Full record

ReviewCurrent opinion in virology2021

Targeting of viral RNAs by Upf1-mediated RNA decay pathways.

Jared P May, Anne E Simon

Open access · greenAbstract readReview
In one paragraph

Review in Current opinion in virology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
1.6field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 41 citations in OpenAlex.

  1. Article
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  3. Megaplasmids associate withbioRxiv : the preprint server for biology · 2025
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  7. Fine mapping a QTL for BYDV-PAV resistance in maize.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2024
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  10. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors at 2 institutions in 1 country.

Jared P MayDepartment of Cell and Molecular Biology and Biochemistry, School of Biological and Chemical Sciences, University of Missouri-Kansas City, Kansas City, MO 64110, USA. Electronic address: jpmay@umkc.edu.
Anne E SimonDepartment of Cell Biology and Molecular Genetics, University of Maryland - College Park, College Park, MD, USA. Electronic address: simona@umd.edu.
University of Maryland, College Park · USUniversity of Missouri–Kansas City · US

Funding

Graduate Training in VirologyT32AI125186 · NIAID · UNIV OF MARYLAND, COLLEGE PARK · PI SIMON, ANNE ELIZABETH · 2016 to 2020
$1.3M
Non-canonical translation in plant and animal (+)-strand virusesF32GM119235 · NIGMS · UNIV OF MARYLAND, COLLEGE PARK · PI MAY, JARED PAUL · 2016 to 2018
$174k
NIAID NIH HHS T32 AI125186NIGMS NIH HHS F32 GM119235
6 · The paper itself

Abstract

Viral RNAs are susceptible to co-translational RNA decay pathways mediated by the RNA helicase Upstream frameshift 1 (Upf1). Upf1 is a key component in nonsense-mediated decay (NMD), Staufen1-mediated mRNA decay (SMD), and structure-mediated RNA decay (SRD) pathways, among others. Diverse families of viruses have features that predispose them to Upf1 targeting, but have evolved means to escape decay through the action of cis-acting or trans-acting viral factors. Studies aimed at understanding how viruses are subjected to and circumvent NMD have increased our understanding of NMD target selection of host mRNAs. This review focuses on the knowledge gained from studying NMD in viral systems as well as related Upf1-dependent pathways and how these pathways restrict virus replication.

Indexed as

3' Untranslated RegionsAnimalsHost-Pathogen InteractionsHumansNonsense Mediated mRNA DecayRNA-Binding ProteinsRNA HelicasesRNA, MessengerRNA, ViralTrans-ActivatorsViral ProteinsViruses3' Untranslated RegionsRNA-Binding ProteinsRNA HelicasesRNA, MessengerRNA, ViralTrans-ActivatorsViral Proteins

Identifiers

PMID33341474
PMCPMC8744489
OpenAlexW3115697597

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.