Evidence map›Paper›PMID 33338036›Full record

ArticlePloS one2020

Periplasm-enriched fractions from Xanthomonas citri subsp. citri type A and X. fuscans subsp. aurantifolii type B present distinct proteomic profiles under in vitro pathogenicity induction.

Flávia S Zandonadi, Sílvia P Ferreira, André V Alexandrino, Carolina M Carnielli, Juliana Artier, Mariana P Barcelos, Nicole C S Nicolela, Evandro L Prieto, Leandro S Goto, José Belasque and 1 more

Abstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Xylose Isomerase Depletion Enhances Virulence ofInternational journal of molecular sciences · 2023
    Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Flávia S ZandonadiLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.
Sílvia P FerreiraLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.
André V AlexandrinoLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.ORCID 0000-0002-0111-3491
Carolina M CarnielliLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.ORCID 0000-0001-8336-7390
Juliana ArtierLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.
Mariana P BarcelosLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.
Nicole C S NicolelaLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.
Evandro L PrietoLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.
Leandro S GotoLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.
José BelasqueDepartamento de Fitopatologia e Nematologia, Escola Superior de Agricultura "Luiz de Queiroz", Universidade de São Paulo, USP, Piracicaba, São Paulo, Brazil.
Maria Teresa Marques Novo-MansurLaboratório de Bioquímica e Biologia Molecular Aplicada, Departamento de Genética e Evolução, Universidade Federal de São Carlos, UFSCar, São Carlos, São Paulo, Brazil.ORCID 0000-0003-0308-6287

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The causative agent of Asiatic citrus canker, the Gram-negative bacterium Xanthomonas citri subsp. citri (XAC), produces more severe symptoms and attacks a larger number of citric hosts than Xanthomonas fuscans subsp. aurantifolii XauB and XauC, the causative agents of cancrosis, a milder form of the disease. Here we report a comparative proteomic analysis of periplasmic-enriched fractions of XAC and XauB in XAM-M, a pathogenicity- inducing culture medium, for identification of differential proteins. Proteins were resolved by two-dimensional electrophoresis combined with liquid chromatography-mass spectrometry. Among the 12 proteins identified from the 4 unique spots from XAC in XAM-M (p<0.05) were phosphoglucomutase (PGM), enolase, xylose isomerase (XI), transglycosylase, NAD(P)H-dependent glycerol 3-phosphate dehydrogenase, succinyl-CoA synthetase β subunit, 6-phosphogluconate dehydrogenase, and conserved hypothetical proteins XAC0901 and XAC0223; most of them were not detected as differential for XAC when both bacteria were grown in NB medium, a pathogenicity non-inducing medium. XauB showed a very different profile from XAC in XAM-M, presenting 29 unique spots containing proteins related to a great diversity of metabolic pathways. Preponderant expression of PGM and XI in XAC was validated by Western Blot analysis in the periplasmic-enriched fractions of both bacteria. This work shows remarkable differences between the periplasmic-enriched proteomes of XAC and XauB, bacteria that cause symptoms with distinct degrees of severity during citrus infection. The results suggest that some proteins identified in XAC can have an important role in XAC pathogenicity.

Indexed as

ProteomicsAmino Acid SequenceBacterial ProteinsCarbonGenes, BacterialMolecular Sequence AnnotationPeriplasmPhosphoglucomutaseReproducibility of ResultsXanthomonasBacterial ProteinsCarbonPhosphoglucomutase

Identifiers

PMID33338036
PMCPMC7748154

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.