Evidence map›Paper›PMID 33337855›Full record

ArticleBiochemistry2021

Steric and Electronic Interactions at Gln154 in ZEITLUPE Induce Reorganization of the LOV Domain Dimer Interface.

Ashutosh Pudasaini, Robert Green, Young Hun Song, Abby Blumenfeld, Nischal Karki, Takato Imaizumi, Brian D Zoltowski

Open access · greenAbstract read
In one paragraph

Article in Biochemistry, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 2 countries.

Ashutosh PudasainiDepartment of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States.
Robert GreenDepartment of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States.
Young Hun SongDepartment of Agricultural Biotechnology, Seoul National University, Seoul 08826, Korea.
Abby BlumenfeldDepartment of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States.
Nischal KarkiDepartment of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States.
Takato ImaizumiDepartment of Biology, University of Washington, Seattle, Washington 98195-1800, United States.
Brian D ZoltowskiDepartment of Chemistry, Southern Methodist University, Dallas, Texas 75275, United States.ORCID 0000-0001-6749-0743
Southern Methodist University · USSeoul National University · KRUniversity of Washington · US

Funding

Molecular Mechanisms of Seasonal Time MeasurementR01GM079712 · NIGMS · UNIVERSITY OF WASHINGTON · PI IMAIZUMI, TAKATO · 2007 to 2022
$3.5M
Structural Flexibility Mediates Circadian Adaptation in Diverse OrganismsR15GM109282 · NIGMS · SOUTHERN METHODIST UNIVERSITY · PI ZOLTOWSKI, BRIAN DAVID · 2014 to 2021
$1.2M
NIGMS NIH HHS R01 GM079712NIGMS NIH HHS R15 GM109282
6 · The paper itself

Abstract

Plants measure light quality, intensity, and duration to coordinate growth and development with daily and seasonal changes in environmental conditions; however, the molecular details linking photochemistry to signal transduction remain incomplete. Two closely related light, oxygen, or voltage (LOV) domain-containing photoreceptor proteins, ZEITLUPE (ZTL) and FLAVIN-BINDING, KELCH REPEAT, F-BOX 1 (FKF1), divergently regulate the protein stability of circadian clock and photoperiodic flowering components to mediate daily and seasonal development. Using structural approaches, we identified that mutations at the Gly46 position led to global rearrangements of the ZTL dimer interface in the isolated ZTL-LOV domain. Specifically, G46S and G46A variants induce a 180° rotation about the ZTL-LOV dimer interface that is coupled to ordering of N- and C-terminal signaling elements. These conformational changes hinge upon rotation of a C-terminal Gln residue (Gln154) analogous to that present in light-state structures of ZTL. In contrast to other LOV proteins, a Q154L variant retains light-state interactions with GIGANTEA (GI), thereby indicating N5 protonation is not required for ZTL signaling. The results presented herein confirm a divergent signaling mechanism within ZTL, whereby steric and electronic effects following adduct formation can be sufficient for signal propagation in LOV proteins containing a Gly residue at position 46. Examination of bacterial LOV structures with Gly residues at the equivalent position suggests that mechanisms of signal transduction in LOV proteins may be fluid across the LOV protein family.

Indexed as

Protein MultimerizationArabidopsisArabidopsis ProteinsElectronicsGlutamineLightMutationOxygenProtein ConformationProtein StabilityArabidopsis ProteinsFKF1 protein, ArabidopsisGlutamineOxygenZTL protein, Arabidopsis

Identifiers

PMID33337855
PMCPMC8211391
OpenAlexW3113820141

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.