Evidence map›Paper›PMID 33335694›Full record

ArticleComputational and structural biotechnology journal2020

Genetic perturbation of IFN-α transcriptional modulators in human endothelial cells uncovers pivotal regulators of angiogenesis.

Francesco Ciccarese, Angela Grassi, Lorenza Pasqualini, Stefania Rosano, Alessio Noghero, Francesca Montenegro, Federico Bussolino, Barbara Di Camillo, Lorenzo Finesso, Gianna Maria Toffolo and 2 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.7field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 13 citations in OpenAlex.

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  5. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors at 5 institutions in 1 country.

Francesco CiccareseImmunology and Molecular Oncology Unit, Veneto Institute of Oncology IOV - IRCCS, via Gattamelata 64, 35128 Padova, Italy.
Angela GrassiImmunology and Molecular Oncology Unit, Veneto Institute of Oncology IOV - IRCCS, via Gattamelata 64, 35128 Padova, Italy.
Lorenza PasqualiniImmunology and Molecular Oncology Unit, Veneto Institute of Oncology IOV - IRCCS, via Gattamelata 64, 35128 Padova, Italy.
Stefania RosanoCandiolo Cancer Institute - IRCCS, Strada Provinciale 142, km 3.95, 10060 Candiolo, Italy.
Alessio NogheroCandiolo Cancer Institute - IRCCS, Strada Provinciale 142, km 3.95, 10060 Candiolo, Italy.
Francesca MontenegroDepartment of Surgery, Oncology and Gastroenterology, University of Padova, via Gattamelata 64, 35128 Padova, Italy.
Federico BussolinoCandiolo Cancer Institute - IRCCS, Strada Provinciale 142, km 3.95, 10060 Candiolo, Italy.
Barbara Di CamilloDepartment of Information Engineering, University of Padova, via Gradenigo 6, 35131 Padova, Italy.
Lorenzo FinessoInstitute of Electronics, Computer and Telecommunication Engineering, CNR, corso Stati Uniti 4, 35127 Padova, Italy.
Gianna Maria ToffoloDepartment of Information Engineering, University of Padova, via Gradenigo 6, 35131 Padova, Italy.
Stefania MitolaDepartment of Molecular and Translational Medicine, University of Brescia, viale Europa 11, 25123 Brescia, Italy.
Stefano IndraccoloImmunology and Molecular Oncology Unit, Veneto Institute of Oncology IOV - IRCCS, via Gattamelata 64, 35128 Padova, Italy.
Istituto Oncologico Veneto · ITCandiolo Cancer Institute · ITUniversity of Padua · ITInstitute of Electronics, Computer and Telecommunication Engineering · ITUniversity of Brescia · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Interferon-α (IFN-α) comprises a family of 13 cytokines involved in the modulation of antiviral, immune, and anticancer responses by orchestrating a complex transcriptional network. The activation of IFN-α signaling pathway in endothelial cells results in decreased proliferation and migration, ultimately leading to suppression of angiogenesis. In this study, we knocked-down the expression of seven established or candidate modulators of IFN-α response in endothelial cells to reconstruct a gene regulatory network and to investigate the antiangiogenic activity of IFN-α. This genetic perturbation approach, along with the analysis of interferon-induced gene expression dynamics, highlighted a complex and highly interconnected network, in which the angiostatic chemokine C-X-C Motif Chemokine Ligand 10 (CXCL10) was a central node targeted by multiple modulators. IFN-α-induced secretion of CXCL10 protein by endothelial cells was blunted by the silencing of Signal Transducer and Activator of Transcription 1 (STAT1) and of Interferon Regulatory Factor 1 (IRF1) and it was exacerbated by the silencing of Ubiquitin Specific Peptidase 18 (USP18).

Indexed as

AngiogenesisCXCL10IFN-αRegulatory networkTranscriptional modulators

Identifiers

PMID33335694
PMCPMC7734228
OpenAlexW3109108018

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.