Evidence map›Paper›PMID 33335292›Full record

ArticleScientific reports2020

Upregulation of 5'-terminal oligopyrimidine mRNA translation upon loss of the ARF tumor suppressor.

Kyle A Cottrell, Ryan C Chiou, Jason D Weber

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.3field-weighted citation impact, top 42% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 6 citations in OpenAlex.

  1. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Kyle A CottrellDivision of Molecular Oncology, Department of Medicine, Siteman Cancer Center, Washington University School of Medicine, 660 South Euclid Avenue, Campus, Box 8069, Saint Louis, MO, 63110, USA.
Ryan C ChiouDivision of Molecular Oncology, Department of Medicine, Siteman Cancer Center, Washington University School of Medicine, 660 South Euclid Avenue, Campus, Box 8069, Saint Louis, MO, 63110, USA.
Jason D WeberDivision of Molecular Oncology, Department of Medicine, Siteman Cancer Center, Washington University School of Medicine, 660 South Euclid Avenue, Campus, Box 8069, Saint Louis, MO, 63110, USA. jweber@wustl.edu.
Molecular Oncology (United States) · USWashington University in St. Louis · US

Funding

PRE-AND POSTGRADUATE TRAINING IN MOLECULAR HEMATOLOGYT32HL007088 · NHLBI · WASHINGTON UNIVERSITY · PI Grant Anthony Challen, Stephen Oh · 1985 to 2026
$14.1M
REGULATION OF TUMOR SUPPRESSION BY ARFR01CA190986 · NCI · WASHINGTON UNIVERSITY · PI WEBER, JASON · 2016 to 2020
$1.7M
The role of Arf tumor suppressor in translational reprogrammingF32GM131514 · NIGMS · WASHINGTON UNIVERSITY · PI COTTRELL, KYLE · 2019 to 2020
$127k
NCI NIH HHS R01 CA190986NHLBI NIH HHS T32 HL007088NIGMS NIH HHS F32 GM131514NIH HHS 5T32HL007088
6 · The paper itself

Abstract

Tumor cells require nominal increases in protein synthesis in order to maintain high proliferation rates. As such, tumor cells must acquire enhanced ribosome production. How the numerous mutations in tumor cells ultimately achieve this aberrant production is largely unknown. The gene encoding ARF is the most commonly deleted gene in human cancer. ARF plays a significant role in regulating ribosomal RNA synthesis and processing, ribosome export into the cytoplasm, and global protein synthesis. Utilizing ribosome profiling, we show that ARF is a major suppressor of 5'-terminal oligopyrimidine mRNA translation. Genes with increased translational efficiency following loss of ARF include many ribosomal proteins and translation factors. Knockout of p53 largely phenocopies ARF loss, with increased protein synthesis and expression of 5'-TOP encoded proteins. The 5'-TOP regulators eIF4G1 and LARP1 are upregulated in Arf- and p53-null cells.

Indexed as

ADP-Ribosylation Factor 1AutoantigensCell ProliferationEukaryotic Initiation Factor-4GHumansNeoplasmsProtein BiosynthesisRibonucleoproteinsRibosomal ProteinsRibosomesSS-B AntigenTranscriptional ActivationTumor Suppressor Protein p53ADP-Ribosylation Factor 1AutoantigensEIF4G1 protein, humanEukaryotic Initiation Factor-4GRibonucleoproteinsRibosomal ProteinsSS-B AntigenTP53 protein, humanTumor Suppressor Protein p53

Identifiers

PMID33335292
PMCPMC7747592
OpenAlexW3112701647

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.