Evidence map›Paper›PMID 33335167›Full record

ArticleScientific reports2020

Reference gene selection for transcriptional profiling in Cryptocercus punctulatus, an evolutionary link between Isoptera and Blattodea.

Zhen Li, Xiangrui Li, Qingwen Zhang, Ling Yuan, Xuguo Zhou

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 39% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Selection and Validation of Reliable Reference Genes forCurrent issues in molecular biology · 2024
    Article
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Zhen LiDepartment of Entomology and MOA Key Lab of Pest Monitoring and Green Management, China Agricultural University, Beijing, China.
Xiangrui LiDepartment of Entomology, University of Kentucky, S-225 Agricultural Science Center North, Lexington, KY, 40546-0091, USA.
Qingwen ZhangDepartment of Entomology and MOA Key Lab of Pest Monitoring and Green Management, China Agricultural University, Beijing, China.
Ling YuanDepartment of Plant and Soil Sciences, KTRDC, University of Kentucky, Lexington, KY, 40546, USA.
Xuguo ZhouDepartment of Entomology, University of Kentucky, S-225 Agricultural Science Center North, Lexington, KY, 40546-0091, USA. xuguozhou@uky.edu.ORCID 0000-0002-2385-8224
University of Kentucky · USChina Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The subsocial life style and wood-feeding capability of Cryptocercus gives us an evolutionary key to unlock some outstanding questions in biology. With the advent of the Genomics Era, there is an unprecedented opportunity to address the evolution of eusociality and the acquisition of lignocellulases at the genetic level. However, to quantify gene expression, an appropriate normalization strategy is warranted to control for the non-specific variations among samples across different experimental conditions. To search for the internal references, 10 housekeeping genes from a gut transcriptome of a wood-feeding cockroach, Cryptocercus punctulatus, were selected as the candidates for the RT-qPCR analysis. The expression profiles of these candidates, including ACT, EF1α, GAPDH, HSP60, HSP70, αTUB, UBC, RPS18, ATPase and GST, were analyzed using a panel of analytical tools, including geNorm, NormFinder, BestKeeper, and comparative ΔC

Indexed as

Evolution, MolecularGene Expression ProfilingSelection, GeneticAnimalsCockroachesGene ExpressionGenes, InsectGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)IsopteraReproducibility of ResultsGlyceraldehyde-3-Phosphate Dehydrogenase (Phosphorylating)

Identifiers

PMID33335167
PMCPMC7746730
OpenAlexW3112508441

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.