Evidence map›Paper›PMID 33335035›Full record

ArticleScience (New York, N.Y.)2020

Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility.

Wesley C Warren, R Alan Harris, Marina Haukness, Ian T Fiddes, Shwetha C Murali, Jason Fernandes, Philip C Dishuck, Jessica M Storer, Muthuswamy Raveendran, LaDeana W Hillier and 50 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 120 papers.

0numbers the graph read from it
0cells of the map it votes in
120citing papers in PubMed
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

120 citing papers in PubMed, 191 citations in OpenAlex.

  1. Article
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  9. Census and genetic analysis of the United States marmoset population.bioRxiv : the preprint server for biology · 2026
    Article
  10. Article
  11. Rhesus macaques with anProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  12. Article
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60 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

60 authors at 20 institutions in 4 countries.

Wesley C WarrenDepartment of Animal Sciences, Bond Life Sciences Center, University of Missouri, Columbia, MO 65211, USA. warrenwc@missouri.edu jr13@bcm.edu eee@gs.washington.edu.ORCID https://orcid.org/0000-0003-2255-2730
R Alan HarrisHuman Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.ORCID https://orcid.org/0000-0002-7333-4752
Marina HauknessComputational Genomics Laboratory, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0001-9991-8089
Ian T FiddesInscripta Inc., Boulder, CO 80301, USA.ORCID https://orcid.org/0000-0002-1580-7443
Shwetha C MuraliDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Jason FernandesDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0002-8625-1796
Philip C DishuckDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID https://orcid.org/0000-0003-2223-9787
Jessica M StorerDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.ORCID https://orcid.org/0000-0002-9619-5265
Muthuswamy RaveendranHuman Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA.ORCID https://orcid.org/0000-0001-6185-4059
LaDeana W HillierDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
David PorubskyDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.
Yafei MaoDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID https://orcid.org/0000-0002-9648-4278
David GordonDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID https://orcid.org/0000-0001-6552-4022
Mitchell R VollgerDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID https://orcid.org/0000-0002-8651-1615
Alexandra P LewisDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID https://orcid.org/0000-0002-6195-4786
Katherine M MunsonDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID https://orcid.org/0000-0001-8413-6498
Elizabeth DeVogelaereComputational Genomics Laboratory, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.
Joel ArmstrongComputational Genomics Laboratory, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0003-2077-4671
Mark DiekhansComputational Genomics Laboratory, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0002-0430-0989
Jerilyn A WalkerDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.
Chad TomlinsonMcDonnell Genome Institute, Washington University, St. Louis, MO 63108, USA.ORCID https://orcid.org/0000-0001-9905-6159
Tina A Graves-LindsayMcDonnell Genome Institute, Washington University, St. Louis, MO 63108, USA.
Milinn KremitzkiMcDonnell Genome Institute, Washington University, St. Louis, MO 63108, USA.
Sofie R SalamaDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0001-6999-7193
Peter A AudanoDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA.ORCID https://orcid.org/0000-0002-5187-0415
Merly EscalonaDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0003-0213-4777
Nicholas W MaurerDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0003-0007-7887
Francesca AntonacciDepartment of Biology, University of Bari 'Aldo Moro', 70125 Bari, Italy.ORCID https://orcid.org/0000-0002-5833-6186
Ludovica MercuriDepartment of Biology, University of Bari 'Aldo Moro', 70125 Bari, Italy.ORCID https://orcid.org/0000-0002-3688-4501
Flavia A M MaggioliniDepartment of Biology, University of Bari 'Aldo Moro', 70125 Bari, Italy.ORCID https://orcid.org/0000-0001-6832-9388
Claudia Rita CatacchioDepartment of Biology, University of Bari 'Aldo Moro', 70125 Bari, Italy.ORCID https://orcid.org/0000-0002-2166-723X
Jason G UnderwoodPacific Biosciences of California, Seattle, WA 94025, USA.
David H O'ConnorDepartment of Pathology and Laboratory Medicine, Wisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI 53711, USA.ORCID https://orcid.org/0000-0003-2139-470X
Ashley D SandersEuropean Molecular Biology Laboratory, Genome Biology Unit, Heidelberg, Germany.ORCID https://orcid.org/0000-0003-3945-0677
Jan O KorbelEuropean Molecular Biology Laboratory, Genome Biology Unit, Heidelberg, Germany.
Betsy FergusonDivision of Genetics, Oregon National Primate Research Center, Oregon Health and Science University, Beaverton, OR 97006, USA.ORCID https://orcid.org/0000-0002-6992-3538
H Michael KubischTulane National Primate Research Center, Covington, LA 70433, USA.ORCID https://orcid.org/0000-0001-6281-8420
Louis PickerOregon National Primate Research Center and Vaccine and Gene Therapy Institute, Oregon Health Sciences University, Beaverton, OR 97006, USA.ORCID https://orcid.org/0000-0003-0546-398X
Ned H KalinDepartment of Psychiatry, University of Wisconsin School of Medicine and Public Health, Madison, WI 53719, USA.
Douglas RoseneDepartment of Anatomy and Neurobiology, Boston University School of Medicine, Boston, MA 02118, USA.
Jon LevineDepartment of Neuroscience, University of Wisconsin, Madison, WI 53175, USA.ORCID https://orcid.org/0000-0003-4177-6406
David H AbbottWisconsin National Primate Research Center, University of Wisconsin, Madison, WI 53171, USA.
Stanton B GrayThe University of Texas MD Anderson Cancer Center, Michale E. Keeling Center for Comparative Medicine and Research, Bastrop, TX 78602, USA.ORCID https://orcid.org/0000-0002-8816-0898
Mar M SanchezYerkes National Primate Research Center, Atlanta, GA 30329, USA.ORCID https://orcid.org/0000-0001-7701-2892
Zsofia A Kovacs-BalintYerkes National Primate Research Center, Atlanta, GA 30329, USA.
Joseph W KemnitzWisconsin National Primate Research Center, University of Wisconsin, Madison, WI 53171, USA.ORCID https://orcid.org/0000-0001-6511-404X
Sara M ThomasyDepartment of Surgical and Radiological Sciences, School of Veterinary Medicine, University of California-Davis, Davis, CA 95616, USA.ORCID https://orcid.org/0000-0001-5617-9677
Jeffrey A RobertsCalifornia National Primate Research Center, Davis, CA 95616, USA.ORCID https://orcid.org/0000-0002-0159-6112
Erin L KinnallyCalifornia National Primate Research Center, Davis, CA 95616, USA.
John P CapitanioCalifornia National Primate Research Center, Davis, CA 95616, USA.ORCID https://orcid.org/0000-0002-3680-1323
J H Pate SkeneDepartment of Neurobiology, Duke University School of Medicine, Durham, NC 27710, USA.ORCID https://orcid.org/0000-0003-3205-0697
Michael PlattDepartment of Neuroscience, Perelman School of Medicine, University of Pennsylvania, Philadelphia, PA 19104, USA.ORCID https://orcid.org/0000-0003-3912-8821
Shelley A ColePopulation Health Program, Texas Biomedical Research Institute and Southwest National Primate Research Center, San Antonio, TX 78227, USA.ORCID https://orcid.org/0000-0002-2651-0127
Richard E GreenDepartment of Biomolecular Engineering, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0003-0516-5827
Mario VenturaDepartment of Biology, University of Bari 'Aldo Moro', 70125 Bari, Italy.ORCID https://orcid.org/0000-0001-7762-8777
Roger W WisemanDepartment of Pathology and Laboratory Medicine, Wisconsin National Primate Research Center, University of Wisconsin-Madison, Madison, WI 53711, USA.ORCID https://orcid.org/0000-0002-7682-7085
Benedict PatenComputational Genomics Laboratory, University of California-Santa Cruz, Santa Cruz, CA 95064, USA.ORCID https://orcid.org/0000-0001-8863-3539
Mark A BatzerDepartment of Biological Sciences, Louisiana State University, Baton Rouge, LA 70803, USA.ORCID https://orcid.org/0000-0001-5699-863X
Jeffrey RogersHuman Genome Sequencing Center, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, TX 77030, USA. warrenwc@missouri.edu jr13@bcm.edu eee@gs.washington.edu.ORCID https://orcid.org/0000-0002-7374-6490
Evan E EichlerDepartment of Genome Sciences, University of Washington, Seattle, WA 98195, USA. warrenwc@missouri.edu jr13@bcm.edu eee@gs.washington.edu.ORCID https://orcid.org/0000-0002-8246-4014
University of California, Santa Cruz · USUniversity of Washington · USUniversity of Bari Aldo Moro · ITBaylor College of Medicine · USHoward Hughes Medical Institute · USJames S. McDonnell Foundation · USLouisiana State University · USUniversity of California, Davis · USUniversity of Wisconsin–Madison · USUniversity of Wisconsin System · USEuropean Molecular Biology Laboratory · DEOregon National Primate Research Center · USBoston University · USDuke University · USEmory National Primate Research CenterEmory University · USInstitut Pertanian Stiper · IDSeattle Pacific University · USTexas Biomedical Research Institute · USThe University of Texas MD Anderson Cancer Center · US

Funding

Upgrade of confocal microscopy at the Oregon National Primate Research CenterP51OD011092 · OD · OREGON HEALTH & SCIENCE UNIVERSITY · PI Bonnie J. Nagel · 2012 to 2026
$203.9M
National Institute on Aging (NIA) ColonyP51OD011107 · OD · UNIVERSITY OF CALIFORNIA AT DAVIS · PI Simon J. Atkinson · 2012 to 2026
$191.5M
Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
WNPRC Supplemental Request for Nonhuman Primate Enclosures to Equip HIV/AIDS-Related Research FacilitiesP51OD011106 · OD · UNIVERSITY OF WISCONSIN-MADISON · PI Dorota A. Grejner-Brzezinska · 2012 to 2026
$150.7M
Tulane NPRC SPF Sheltered Outdoor Enclosure ExpansionP51OD011104 · OD · TULANE UNIVERSITY OF LOUISIANA · PI L Lee HAMM · 2012 to 2026
$142.4M
Viral Testing CoreU42OD024282 · OD · TULANE UNIVERSITY OF LOUISIANA · PI KASI E RUSSELL-LODRIGUE · 2017 to 2026
$25.7M
The WashU-UCSC-EBI Human Genome Reference Center."U41HG010972 · NHGRI · WASHINGTON UNIVERSITY · PI Ira M Hall, Heng Li · 2019 to 2026
$24.9M
INTERDISCIPLINARY TRAINING IN GENOMIC SCIENCEST32HG000035 · NHGRI · UNIVERSITY OF WASHINGTON · PI Bruce Colston Trapnell · 1995 to 2026
$24.2M
Viral Testing Core - Maintenance of an SPF Macaque Breeding Colony for AIDS ResearchU42OD010568 · OD · TULANE UNIVERSITY OF LOUISIANA · PI KASI E RUSSELL-LODRIGUE · 2013 to 2026
$21.7M
GENCODE Resource ProjectU41HG007234 · NHGRI · SANGER INSTITUTE · PI FLICEK, PAUL · 2013 to 2020
$20.3M
GENCODE: comprehensive reference genome annotation for human and mouseU24HG007234 · NHGRI · EUROPEAN MOLECULAR BIOLOGY LABORATORY · PI Fergal James Martin · 2021 to 2026
$16.1M
DEVELOPMENT AND REGULATION OF EMOTION IN PRIMATESR01MH046729 · NIMH · UNIVERSITY OF WISCONSIN-MADISON · PI Ned H Kalin · 1990 to 2026
$15.3M
Howard Hughes Medical InstituteNHGRI NIH HHS R01 HG002385NHGRI NIH HHS R01 HG002939NHGRI NIH HHS R01 HG010329NHGRI NIH HHS R01 HG010485NHGRI NIH HHS T32 HG000035NHGRI NIH HHS T32 HG008345NHGRI NIH HHS U01 HG010961NHGRI NIH HHS U24 HG007234NHGRI NIH HHS U24 HG009081NHGRI NIH HHS U24 HG009084NHGRI NIH HHS U41 HG007234NHGRI NIH HHS U41 HG010972NHGRI NIH HHS U54 HG007990NHLBI NIH HHS U01 HL137183NIGMS NIH HHS R01 GM059290NIH HHS P51 OD011092NIH HHS P51 OD011104NIH HHS P51 OD011106NIH HHS P51 OD011107NIH HHS P51 OD011132NIH HHS R24 OD010962NIH HHS R24 OD011173NIH HHS R24 OD021324NIH HHS U42 OD010568NIH HHS U42 OD024282NIMH NIH HHS P50 MH100031NIMH NIH HHS R01 MH046729NIMH NIH HHS R01 MH081884
6 · The paper itself

Abstract

The rhesus macaque (

Indexed as

Genetic Predisposition to DiseaseGenomePolymorphism, Single NucleotideAnimalsGenetic VariationHumansMacaca mulattaMolecular Sequence AnnotationWhole Genome Sequencing

Identifiers

PMID33335035
PMCPMC7818670
OpenAlexW3112069035

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.