Evidence map›Paper›PMID 33335017›Full record

ArticleScience (New York, N.Y.)2021

HSP70 chaperones RNA-free TDP-43 into anisotropic intranuclear liquid spherical shells.

Haiyang Yu, Shan Lu, Kelsey Gasior, Digvijay Singh, Sonia Vazquez-Sanchez, Olga Tapia, Divek Toprani, Melinda S Beccari, John R Yates, Sandrine Da Cruz and 5 more

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 211 papers.

0numbers the graph read from it
0cells of the map it votes in
211citing papers in PubMed
22.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

211 citing papers in PubMed, 362 citations in OpenAlex.

  1. Article
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  11. TDP-43 Aggregation: The Healthy-Toxic Balance of the Prion-Like Domain.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Review
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151 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 7 institutions in 4 countries.

Haiyang YuLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA. dcleveland@ucsd.edu haiyang-yu@ucsd.edu.ORCID https://orcid.org/0000-0003-3460-6716
Shan Lu *Ludwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.ORCID https://orcid.org/0000-0003-4740-0610
Kelsey Gasior *Department of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Digvijay SinghDivision of Biological Sciences, University of California, San Diego, San Diego, CA, USA.
Sonia Vazquez-SanchezLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.ORCID https://orcid.org/0000-0002-8107-5850
Olga TapiaCentro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Madrid, Spain.ORCID https://orcid.org/0000-0002-0802-7975
Divek TopraniLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.ORCID https://orcid.org/0000-0003-0913-2686
Melinda S BeccariLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.ORCID https://orcid.org/0000-0003-1019-6388
John R YatesDepartments of Molecular Medicine and Neurobiology, The Scripps Research Institute, La Jolla, CA, USA.ORCID https://orcid.org/0000-0001-5267-1672
Sandrine Da CruzLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA.ORCID https://orcid.org/0000-0003-1986-4565
Jay M NewbyDepartment of Mathematical and Statistical Sciences, University of Alberta, Edmonton, Alberta, Canada.ORCID https://orcid.org/0000-0001-9988-2020
Miguel LafargaCentro de Investigación Biomédica en Red sobre Enfermedades Neurodegenerativas (CIBERNED), Madrid, Spain.ORCID https://orcid.org/0000-0003-3402-1152
Amy S GladfelterDepartment of Biology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.ORCID https://orcid.org/0000-0002-2490-6945
Elizabeth VillaDivision of Biological Sciences, University of California, San Diego, San Diego, CA, USA.ORCID https://orcid.org/0000-0003-4677-9809
Don W ClevelandLudwig Institute for Cancer Research, University of California at San Diego, La Jolla, CA, USA. dcleveland@ucsd.edu haiyang-yu@ucsd.edu.ORCID https://orcid.org/0000-0002-1934-3682
Ludwig Cancer Research · USUniversity of California San Diego · USUniversity of North Carolina at Chapel Hill · USBiomedical Research Networking Center on Neurodegenerative Diseases · ESScripps Research Institute · USUniversidad de Cantabria · ESUniversity of Alberta · CA

Funding

TrainingP41GM103533 · NIGMS · UNIVERSITY OF WASHINGTON · PI YATES III, JOHN R · 2012 to 2021
$20.7M
NEURONAL FILAMENT SYNTHESIS, ASSEMBLY, AND FUNCTIONR01NS027036 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Bogdan Bintu, Don W Cleveland · 1989 to 2026
$11.8M
U of Calif, San Diego Neuroscience Microscopy ImagingP30NS047101 · NINDS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI GLEESON, JOSEPH G, ZHENG, BINHAI · 2003 to 2022
$9.0M
Training Program in Basic Clinical GeneticsT32GM008666 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI HAMILTON, BRUCE A · 1998 to 2021
$8.6M
Cytoplasmic Organization by phase transitionsR01GM081506 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI GLADFELTER, AMY S · 2010 to 2023
$4.0M
Opening Windows into the Cell: Revealing the Molecular Architecture of the Nuclear PeripheryDP2GM123494 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI VILLA, ELIZABETH · 2016 to 2019
$2.5M
Multidisciplinary training in basic and translational Alzheimer's disease researchT32AG066596 · NIA · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI BREWER, JAMES B · 2020 to 2024
$2.2M
Determining the molecular organization of TDP-43 in liquid spherical annuli and establishing a designer gene therapeutic strategy to degrade TDP-43 aggregatesK99NS114162 · NINDS · LUDWIG INSTITUTE FOR CANCER RES LTD · PI YU, HAIYANG · 2020 to 2021
$250k
Determine how loss-of-function of the TBK1 kinase causes age-dependent degeneration in frontotemporal dementiaF32AG059358 · NIA · LUDWIG INSTITUTE FOR CANCER RES LTD · PI YU, HAIYANG · 2018 to 2019
$116k
NIA NIH HHS F32 AG059358NIA NIH HHS T32 AG066596NIGMS NIH HHS DP2 GM123494NIGMS NIH HHS P41 GM103533NIGMS NIH HHS R01 GM081506NIGMS NIH HHS T32 GM008666NINDS NIH HHS K99 NS114162NINDS NIH HHS P30 NS047101NINDS NIH HHS R01 NS027036
6 · The paper itself

Abstract

The RNA binding protein TDP-43 forms intranuclear or cytoplasmic aggregates in age-related neurodegenerative diseases. In this study, we found that RNA binding-deficient TDP-43 (produced by neurodegeneration-causing mutations or posttranslational acetylation in its RNA recognition motifs) drove TDP-43 demixing into intranuclear liquid spherical shells with liquid cores. These droplets, which we named "anisosomes", have shells that exhibit birefringence, thus indicating liquid crystal formation. Guided by mathematical modeling, we identified the primary components of the liquid core to be HSP70 family chaperones, whose adenosine triphosphate (ATP)-dependent activity maintained the liquidity of shells and cores. In vivo proteasome inhibition within neurons, to mimic aging-related reduction of proteasome activity, induced TDP-43-containing anisosomes. These structures converted to aggregates when ATP levels were reduced. Thus, acetylation, HSP70, and proteasome activities regulate TDP-43 phase separation and conversion into a gel or solid phase.

Indexed as

Protein AggregatesAgingAnimalsAnisotropyCryoelectron MicroscopyDNA-Binding ProteinsHEK293 CellsHistone DeacetylasesHSP70 Heat-Shock ProteinsHumansLiquid CrystalsMiceMice, Inbred C57BLMutationNeurodegenerative DiseasesNeuronsDNA-Binding ProteinsHistone DeacetylasesHSP70 Heat-Shock ProteinsProteasome Endopeptidase ComplexProteasome InhibitorsProtein AggregatesRNA-Binding ProteinsTARDBP protein, human

Identifiers

PMID33335017
PMCPMC8286096
OpenAlexW3112951837

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.