Evidence map›Paper›PMID 33333017›Full record

ArticleMolecular cell2021

Defective ALC1 nucleosome remodeling confers PARPi sensitization and synthetic lethality with HRD.

Graeme Hewitt, Valerie Borel, Sandra Segura-Bayona, Tohru Takaki, Phil Ruis, Roberto Bellelli, Laura C Lehmann, Lucia Sommerova, Aleksandra Vancevska, Antonia Tomas-Loba and 17 more

Open access · hybridAbstract read
In one paragraph

Article in Molecular cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 97 papers.

0numbers the graph read from it
0cells of the map it votes in
97citing papers in PubMed
6.0field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

97 citing papers in PubMed, 160 citations in OpenAlex.

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37 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

27 authors at 8 institutions in 3 countries.

Graeme HewittThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Valerie BorelThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Sandra Segura-BayonaThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Tohru TakakiThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Phil RuisThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Roberto BellelliThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Laura C LehmannDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, 75124 Uppsala, Sweden.
Lucia SommerovaMedical Research Council (MRC) Molecular Haematology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford OX3 9DS, UK; Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
Aleksandra VancevskaThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Antonia Tomas-LobaCentro Nacional de Investigaciones Cardiovasculares (CNIC), Madrid, Spain.
Kang ZhuSir William Dunn School of Pathology, South Parks Road, University of Oxford, Oxford OX1 3RE, UK.
Christopher CooperSir William Dunn School of Pathology, South Parks Road, University of Oxford, Oxford OX1 3RE, UK.
Kasper FuggerThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Harshil PatelThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Robert GoldstoneThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Deborah Schneider-LuftmanThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Ellie HerbertThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Gordon StampThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Rachel BroughThe CRUK Gene Function Laboratory, The Breast Cancer Now Toby Robins Research Centre, The Institute of Cancer Research, London SW3 6JB, UK.
Stephen PettittThe CRUK Gene Function Laboratory, The Breast Cancer Now Toby Robins Research Centre, The Institute of Cancer Research, London SW3 6JB, UK.
Christopher J LordThe CRUK Gene Function Laboratory, The Breast Cancer Now Toby Robins Research Centre, The Institute of Cancer Research, London SW3 6JB, UK.
Stephen C WestThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK.
Ivan AhelSir William Dunn School of Pathology, South Parks Road, University of Oxford, Oxford OX1 3RE, UK.
Dragana AhelSir William Dunn School of Pathology, South Parks Road, University of Oxford, Oxford OX1 3RE, UK.
J Ross ChapmanMedical Research Council (MRC) Molecular Haematology Unit, Weatherall Institute of Molecular Medicine, University of Oxford, Oxford OX3 9DS, UK; Wellcome Centre for Human Genetics, University of Oxford, Oxford OX3 7BN, UK.
Sebastian DeindlDepartment of Cell and Molecular Biology, Science for Life Laboratory, Uppsala University, 75124 Uppsala, Sweden.
Simon J BoultonThe Francis Crick Institute, 1 Midland Road, London NW1 1AT, UK; Artios Pharma Ltd., Meditrina, Babraham Research Campus, Cambridge CB22 3AT, UK. Electronic address: simon.boulton@crick.ac.uk.
The Francis Crick Institute · GBUniversity of Oxford · GBInstitute of Cancer Research · GBMedical Research Council · GBBreast Cancer Now · GBScience for Life Laboratory · SESpanish National Centre for Cardiovascular Research · ESUppsala University · SE

Funding

Biotechnology and Biological Sciences Research Council BB/R007195/1Cancer Research UK 11582Cancer Research UK 14276Cancer Research UK 16304Cancer Research UK 19270Cancer Research UK 22284Cancer Research UK 24439Cancer Research UK 28990Cancer Research UK C35050/A22284Cancer Research UK C52690/A19270Cancer Research UK FC0010048Medical Research Council FC0010048Wellcome TrustWellcome Trust 090532/Z/09/ZWellcome Trust 210634Wellcome Trust FC0010048
6 · The paper itself

Abstract

Chromatin is a barrier to efficient DNA repair, as it hinders access and processing of certain DNA lesions. ALC1/CHD1L is a nucleosome-remodeling enzyme that responds to DNA damage, but its precise function in DNA repair remains unknown. Here we report that loss of ALC1 confers sensitivity to PARP inhibitors, methyl-methanesulfonate, and uracil misincorporation, which reflects the need to remodel nucleosomes following base excision by DNA glycosylases but prior to handover to APEX1. Using CRISPR screens, we establish that ALC1 loss is synthetic lethal with homologous recombination deficiency (HRD), which we attribute to chromosome instability caused by unrepaired DNA gaps at replication forks. In the absence of ALC1 or APEX1, incomplete processing of BER intermediates results in post-replicative DNA gaps and a critical dependence on HR for repair. Hence, targeting ALC1 alone or as a PARP inhibitor sensitizer could be employed to augment existing therapeutic strategies for HRD cancers.

Indexed as

Chromatin Assembly and DisassemblyAnimalsDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA HelicasesDNA ReplicationHomologous RecombinationMiceMice, KnockoutNeoplasm ProteinsNeoplasms, ExperimentalNucleosomesPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesApex1 protein, mouseChd1l protein, mouseDNA-(Apurinic or Apyrimidinic Site) LyaseDNA-Binding ProteinsDNA HelicasesNeoplasm ProteinsNucleosomesPoly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesALC1base excsion repairBRCAschromatin remodelerDNA damage repairDNA gycosylaseshomologous recombination defieciencyPARPspoly(ADP)-ribosylationsynthetic lethality

Identifiers

PMID33333017
PMCPMC7895907
OpenAlexW3112087052

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.