Evidence map›Paper›PMID 33331817›Full record

ArticleeLife2020

Deep-learning-based three-dimensional label-free tracking and analysis of immunological synapses of CAR-T cells.

Moosung Lee, Young-Ho Lee, Jinyeop Song, Geon Kim, YoungJu Jo, HyunSeok Min, Chan Hyuk Kim, YongKeun Park

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
10.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 77 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 1 institution in 1 country.

Moosung Lee *Department of Physics, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea.ORCID 0000-0002-2826-5401
Young-Ho Lee *Department of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea.
Jinyeop Song *Department of Physics, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea.
Geon KimDepartment of Physics, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea.
YoungJu JoDepartment of Physics, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea.
HyunSeok MinTomocube Inc, Daejeon, Republic of Korea.
Chan Hyuk KimDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon, Republic of Korea.
YongKeun ParkDepartment of Physics, Korea Advanced Institute of Science and Technology (KAIST), Daejeon, Republic of Korea.ORCID 0000-0003-0528-6661
Korea Advanced Institute of Science and Technology · KR

Funding

KAIST Up prorgamNational Research Foundation of Korea 2015R1A3A2066550National Research Foundation of Korea 2017M3C1A3013923National Research Foundation of Korea 2018K000396National Research Foundation of Korea 2019R1A2C1004129The Ministry of Science and ICT 2014M3A9D8032525The Ministry of Science and ICT N11190028
6 · The paper itself

Abstract

The immunological synapse (IS) is a cell-cell junction between a T cell and a professional antigen-presenting cell. Since the IS formation is a critical step for the initiation of an antigen-specific immune response, various live-cell imaging techniques, most of which rely on fluorescence microscopy, have been used to study the dynamics of IS. However, the inherent limitations associated with the fluorescence-based imaging, such as photo-bleaching and photo-toxicity, prevent the long-term assessment of dynamic changes of IS with high frequency. Here, we propose and experimentally validate a label-free, volumetric, and automated assessment method for IS dynamics using a combinational approach of optical diffraction tomography and deep learning-based segmentation. The proposed method enables an automatic and quantitative spatiotemporal analysis of IS kinetics of morphological and biochemical parameters associated with IS dynamics, providing a new option for immunological research.

Indexed as

Deep LearningHumansImmunological SynapsesK562 CellsReceptors, Chimeric AntigenT-LymphocytesTomography, OpticalReceptors, Chimeric Antigencell biologychimeric antigen receptor T cellsdeep learningimmunological synapseimmunologyinflammationoptical diffraction tomographyquantitative phase imaging

Identifiers

PMID33331817
PMCPMC7817186
OpenAlexW3110994764

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.