Evidence map›Paper›PMID 33330419›Full record

ArticleFrontiers in bioengineering and biotechnology2020

Optimization of the Real-Time Quaking-Induced Conversion Assay for Prion Disease Diagnosis.

Inga Zerr, Maria Cramm, Susana Margarida da Silva Correia, Saima Zafar, Anna Villar-Piqué, Franc Llorens, Matthias Schmitz

Open access · goldAbstract read
In one paragraph

Article in Frontiers in bioengineering and biotechnology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 10 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 3 countries.

Inga ZerrDepartment of Neurology, German Center for Neurodegenerative Diseases (DZNE), University Medical Center Göttingen, Göttingen, Germany.
Maria CrammDepartment of Neurology, German Center for Neurodegenerative Diseases (DZNE), University Medical Center Göttingen, Göttingen, Germany.
Susana Margarida da Silva CorreiaDepartment of Neurology, German Center for Neurodegenerative Diseases (DZNE), University Medical Center Göttingen, Göttingen, Germany.
Saima ZafarDepartment of Neurology, German Center for Neurodegenerative Diseases (DZNE), University Medical Center Göttingen, Göttingen, Germany.
Anna Villar-PiquéDepartment of Neurology, German Center for Neurodegenerative Diseases (DZNE), University Medical Center Göttingen, Göttingen, Germany.
Franc LlorensDepartment of Neurology, German Center for Neurodegenerative Diseases (DZNE), University Medical Center Göttingen, Göttingen, Germany.
Matthias SchmitzDepartment of Neurology, German Center for Neurodegenerative Diseases (DZNE), University Medical Center Göttingen, Göttingen, Germany.
German Center for Neurodegenerative Diseases · DEInstitut d'Investigació Biomédica de Bellvitge · ESUniversitätsmedizin Göttingen · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The real-time quaking-induced conversion (RT-QuIC) assay is a highly reproducible and robust methodology exhibiting an excellent pre-mortem diagnostic accuracy for prion diseases. However, the protocols might be time-consuming and improvement of the detection technology is needed. In the present study, we investigated the influence of a pre-analytical cerebrospinal fluid (CSF) treatment with proteinase K (PK) on the kinetic of the RT-QuIC signal response. For this purpose, we added PK at different concentrations in RT-QuIC reactions seeded with Creutzfeldt-Jakob disease (sCJD) CSF. We observed that a mild pre-analytical PK treatment of CSF samples resulted in an increased seeding efficiency of the RT-QuIC reaction. Quantitative seeding parameters, such as a higher area under the curve (AUC) value or a shorter lag phase indicated a higher conversion efficiency after treatment. The diagnostic accuracy resulting from 2 μg/ml PK treatment was analyzed in a retrospective study, where we obtained a sensitivity of 89%. Additionally, we analyzed the agreement with the previously established standard RT-QuIC protocol without PK treatment in a prospective study. Here, we found an overall agreement of 94% to 96%. A Cohen's kappa of 0.9036 (95% CI: 0.8114-0.9958) indicates an almost perfect agreement between both protocols. In conclusion, the outcome of our study can be used for a further optimization of the RT-QuIC assay in particular for a reduction of the testing time.

Indexed as

cerebrospinal fluidCreutzfeldt-Jakob diseasediagnostic testprion proteinreal-time quaking-induced conversion

Identifiers

PMID33330419
PMCPMC7710546
OpenAlexW3099536805

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.