Evidence map›Paper›PMID 33329722›Full record

ArticleFrontiers in genetics2020

Integrated Analysis of m6A Methylome in Cisplatin-Induced Acute Kidney Injury and Berberine Alleviation in Mouse.

Jianxiao Shen, Wanpeng Wang, Xinghua Shao, Jingkui Wu, Shu Li, Xiajing Che, Zhaohui Ni

Open access · goldAbstract read
In one paragraph

Article in Frontiers in genetics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

0numbers the graph read from it
0cells of the map it votes in
16citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

16 citing papers in PubMed, 31 citations in OpenAlex.

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  7. A Review ofMolecules (Basel, Switzerland) · 2023
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  13. The role of N6-methyladenosine (mFrontiers in medicine · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Jianxiao ShenDepartment of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Wanpeng WangDepartment of Nephrology, Lianshui People's Hospital, Lianshui, China.
Xinghua ShaoDepartment of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Jingkui WuDepartment of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Shu LiDepartment of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Xiajing CheDepartment of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Zhaohui NiDepartment of Nephrology, Renji Hospital, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
Renji Hospital · CNShanghai Jiao Tong University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundN6-methyladenosine (m6A) is the most abundant modification known in mRNAs. It participates in a variety of physiological and pathological processes, such as metabolism, inflammation, and apoptosis.

aimsTo explore the mechanism of m6A in cisplatin-induced acute kidney injury (AKI) and berberine alleviation in mouse.

methodsThis study investigated the N6-methyladenosine (m6A) methylome of kidneys from three mouse groups: C57 mice (controls), those with CI-AKI (injury group, IG), and those pretreated with berberine (treatment group, TG). Methylated RNA Immunoprecipitation Next Generation Sequencing (MeRIP-seq) and RNA-seq were performed to identify the differences between the injury group and the control group (IvC) and between the treatment group and the injury group (TvI). Western blotting was performed to identify the protein levels of candidate genes.

resultsIn IvC, differentially methylated genes (DMGs) were enriched in metabolic processes and cell death. In TvI, DMGs were enriched in tissue development. Several genes involved in important pathways related to CI-AKI showed opposite methylation and expression trends in the IvC and TvI comparisons.

conclusionm6A plays an important role in cisplatin induced AKI and berberine may alleviate this process.

Indexed as

berberinecisplatin induced nephrotoxicityFGAHavcr1M6ASLC12A1

Identifiers

PMID33329722
PMCPMC7718005
OpenAlexW3110099189

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.