Evidence map›Paper›PMID 33329479›Full record

ArticleFrontiers in microbiology2020

Splicing Endonuclease Is an Important Player in rRNA and tRNA Maturation in Archaea.

Thandi S Schwarz, Sarah J Berkemer, Stephan H Bernhart, Matthias Weiß, Sébastien Ferreira-Cerca, Peter F Stadler, Anita Marchfelder

Open access · goldAbstract read
In one paragraph

Article in Frontiers in microbiology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.8field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 17 citations in OpenAlex.

  1. Archaeal RNA processing and regulation: expanding the functional landscape.Microbiology and molecular biology reviews : MMBR · 2025
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  11. Ribosome Biogenesis in Archaea.Frontiers in microbiology · 2021
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 4 institutions in 5 countries.

Thandi S SchwarzBiologie II, Ulm University, Ulm, Germany.
Sarah J BerkemerBioinformatics, Department of Computer Science, Leipzig University, Leipzig, Germany.
Stephan H BernhartBioinformatics, Department of Computer Science, Leipzig University, Leipzig, Germany.
Matthias WeißRegensburg Center for Biochemistry, Biochemistry III - Institute of Biochemistry, Genetics and Microbiology, University of Regensburg, Regensburg, Germany.
Sébastien Ferreira-CercaRegensburg Center for Biochemistry, Biochemistry III - Institute of Biochemistry, Genetics and Microbiology, University of Regensburg, Regensburg, Germany.
Peter F StadlerBioinformatics, Department of Computer Science, Leipzig University, Leipzig, Germany.
Anita MarchfelderBiologie II, Ulm University, Ulm, Germany.
Leipzig University · DEUniversität Ulm · DEUniversity of Regensburg · DEUniversity of Copenhagen · DK

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In all three domains of life, tRNA genes contain introns that must be removed to yield functional tRNA. In archaea and eukarya, the first step of this process is catalyzed by a splicing endonuclease. The consensus structure recognized by the splicing endonuclease is a bulge-helix-bulge (BHB) motif which is also found in rRNA precursors. So far, a systematic analysis to identify all biological substrates of the splicing endonuclease has not been carried out. In this study, we employed CRISPRi to repress expression of the splicing endonuclease in the archaeon

Indexed as

rRNA intronrRNA processingsplicing endonucleasetRNA introntRNA processing

Identifiers

PMID33329479
PMCPMC7714728
OpenAlexW3108240325

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.