Evidence map›Paper›PMID 33328495›Full record

ArticleScientific reports2020

Identifying transcription factors that reduce wood recalcitrance and improve enzymatic degradation of xylem cell wall in Populus.

Chiaki Hori, Naoki Takata, Pui Ying Lam, Yuki Tobimatsu, Soichiro Nagano, Jenny C Mortimer, Dan Cullen

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.0field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 14 citations in OpenAlex.

  1. Article
  2. Article
  3. Overexpression of Plasma Membrane HFrontiers in plant science · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 5 institutions in 2 countries.

Chiaki HoriResearch Faculty of Engineering, Hokkaido University, Sapporo, 060-8628, Japan. chori@eng.hokudai.ac.jp.ORCID 0000-0002-5740-153X
Naoki TakataForest Bio-Research Center, Forestry and Forest Products Research Institute, Forest Research and Management Organization, Hitachi, Ibaraki, 319-1301, Japan.ORCID 0000-0002-8479-8165
Pui Ying LamResearch Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto, 611-0011, Japan.ORCID 0000-0001-5025-1308
Yuki TobimatsuResearch Institute for Sustainable Humanosphere, Kyoto University, Uji, Kyoto, 611-0011, Japan.ORCID 0000-0002-7578-7392
Soichiro NaganoForest Tree Breeding Center, Forestry and Forest Products Research Institute, Forest Research and Management Organization, Hitachi, Ibaraki, 319-1301, Japan.ORCID 0000-0002-7933-653X
Jenny C MortimerEnvironmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Joint BioEnergy Institute, Berkeley, CA, 94720, USA.ORCID 0000-0001-6624-636X
Dan CullenU. S. Department of Agriculture, Forest Products Laboratory, Madison, WI, 53726, USA.ORCID 0000-0002-4998-3904
Forestry and Forest Products Research Institute · JPKyoto University · JPForest Products Laboratory · USHokkaido University · JPLawrence Berkeley National Laboratory · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Developing an efficient deconstruction step of woody biomass for biorefinery has been drawing considerable attention since its xylem cell walls display highly recalcitrance nature. Here, we explored transcriptional factors (TFs) that reduce wood recalcitrance and improve saccharification efficiency in Populus species. First, 33 TF genes up-regulated during poplar wood formation were selected as potential regulators of xylem cell wall structure. The transgenic hybrid aspens (Populus tremula × Populus tremuloides) overexpressing each selected TF gene were screened for in vitro enzymatic saccharification. Of these, four transgenic seedlings overexpressing previously uncharacterized TF genes increased total glucan hydrolysis on average compared to control. The best performing lines overexpressing Pt × tERF123 and Pt × tZHD14 were further grown to form mature xylem in the greenhouse. Notably, the xylem cell walls exhibited significantly increased total xylan hydrolysis as well as initial hydrolysis rates of glucan. The increased saccharification of Pt × tERF123-overexpressing lines could reflect the improved balance of cell wall components, i.e., high cellulose and low xylan and lignin content, which could be caused by upregulation of cellulose synthase genes upon the expression of Pt × tERF123. Overall, we successfully identified Pt × tERF123 and Pt × tZHD14 as effective targets for reducing cell wall recalcitrance and improving the enzymatic degradation of woody plant biomass.

Indexed as

Cell WallGene Expression Regulation, EnzymologicGene Expression Regulation, PlantPlant ProteinsPopulusTranscription FactorsWoodPlant ProteinsTranscription Factors

Identifiers

PMID33328495
PMCPMC7744511
OpenAlexW3112202672

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.