ArticleHorticulture research2020
The genome and transcriptome analysis of snake gourd provide insights into its evolution and fruit development and ripening.
Article in Horticulture research, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.
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Who cites it
19 citing papers in PubMed.
- Population-level super-pangenome reveals genome evolution and empowers precision breeding in watermelon.Nature genetics · 2026Article
- Comparative analysis of the Aquaporin gene family in Cucurbitaceae: insights into evolutionary patterns and functional diversity.BMC plant biology · 2026Article
- Combined genomic, transcriptomic, and metabolomic analyses provide insights into the fruit development of bottle gourd (Horticulture research · 2025Article
- Chromosome-level assembly and evolution analysis of the Trichosanthes truncata genome.Scientific data · 2024Article
- Chromosome-level genome assembly and population genomics reveals crucial selection for subgynoecy development in chieh-qua.Horticulture research · 2024Article
- Fine mapping of TFL, a major gene regulating fruit length in snake gourd (Trichosanthes anguina L).BMC plant biology · 2024Article
- Article
- Transcriptomics reveal useful resources for examining fruit development and variation in fruit size inFrontiers in plant science · 2024Article
- Lateral Root Initiation in Cucumber (International journal of molecular sciences · 2023Article
- CuGenDBv2: an updated database for cucurbit genomics.Nucleic acids research · 2023Article
- Diploid chromosome-level reference genome and population genomic analyses provide insights into Gypenoside biosynthesis and demographic evolution ofHorticulture research · 2023Article
- Telomere-to-telomere genome assembly of bitter melon (Horticulture research · 2023Article
- Transcriptomic, metabolomic, and ATAC-seq analysis reveal the regulatory mechanism of senescence of post-harvest tomato fruit.Frontiers in plant science · 2023Article
- The Current Developments in Medicinal Plant Genomics Enabled the Diversification of Secondary Metabolites' Biosynthesis.International journal of molecular sciences · 2022Review
- Different scales of gene duplications occurring at different times have jointly shaped the NBS-LRR genes in Prunus species.Molecular genetics and genomics : MGG · 2022Article
- Identification, Characterization and Function of Orphan Genes Among the Current Cucurbitaceae Genomes.Frontiers in plant science · 2022Article
- De novo transcriptome analysis and identification of candidate genes associated with triterpenoid biosynthesis in Trichosanthes cucumerina L.Plant cell reports · 2021Article
- Combined genomic, transcriptomic, and metabolomic analyses provide insights into chayote (Sechium edule) evolution and fruit development.Horticulture research · 2021Article
- Review on the Development and Applications of Medicinal Plant Genomes.Frontiers in plant science · 2021Review
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Authors and funding
15 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Snake gourd (Trichosanthes anguina L.), which belongs to the Cucurbitaceae family, is a popular ornamental and food crop species with medicinal value and is grown in many parts of the world. Although progress has been made in its genetic improvement, the organization, composition, and evolution of the snake gourd genome remain largely unknown. Here, we report a high-quality genome assembly for snake gourd, comprising 202 contigs, with a total size of 919.8 Mb and an N50 size of 20.1 Mb. These findings indicate that snake gourd has one of the largest genomes of Cucurbitaceae species sequenced to date. The snake gourd genome assembly harbors 22,874 protein-coding genes and 80.0% of the genome consists of repetitive sequences. Phylogenetic analysis reveals that snake gourd is closely related to sponge gourd but diverged from their common ancestor ~33-47 million years ago. The genome sequence reported here serves as a valuable resource for snake gourd genetic research and comparative genomic studies in Cucurbitaceae and other plant species. In addition, fruit transcriptome analysis reveals the candidate genes related to quality traits during snake gourd fruit development and provides a basis for future research on snake gourd fruit development and ripening at the transcript level.
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