Evidence map›Paper›PMID 33326946›Full record

ArticlePhysics in medicine and biology2021

Wavelength censoring for spectroscopy in optical functional neuroimaging.

Brian R White, Jonah A Padawer-Curry, Tiffany Ko, Wesley Baker, Jake Breimann, Akiva S Cohen, Daniel J Licht, Arjun G Yodh

Open access · greenAbstract read
In one paragraph

Article in Physics in medicine and biology, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.8field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 12 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Brian R WhiteDivision of Pediatric Cardiology, Department of Pediatrics, The Children's Hospital of Philadelphia and The Perelman School of Medicine at the University of Pennsylvania, 3401 Civic Center Blvd., Pediatric Cardiology-8NW, Philadelphia, PA 19104, United States of America.ORCID 0000-0001-5196-2339
Jonah A Padawer-CurryDivision of Neurology, Department of Pediatrics, The Children's Hospital of Philadelphia and The Perelman School of Medicine at the University of Pennsylvania, United States of America.
Tiffany KoDivision of Neurology, Department of Pediatrics, The Children's Hospital of Philadelphia and The Perelman School of Medicine at the University of Pennsylvania, United States of America.
Wesley BakerDivision of Neurology, Department of Pediatrics, The Children's Hospital of Philadelphia and The Perelman School of Medicine at the University of Pennsylvania, United States of America.ORCID 0000-0002-3025-6061
Jake BreimannDivision of Neurology, Department of Pediatrics, The Children's Hospital of Philadelphia and The Perelman School of Medicine at the University of Pennsylvania, United States of America.
Akiva S CohenDepartment of Anesthesiology and Critical Care Medicine, The Children's Hospital of Philadelphia. 3615 Civic Center Blvd., Abramson Research Center, Room 816-H, Philadelphia, PA 19104, United States of America.
Daniel J LichtDivision of Neurology, Department of Pediatrics, The Children's Hospital of Philadelphia and The Perelman School of Medicine at the University of Pennsylvania, United States of America.ORCID 0000-0002-4080-843X
Arjun G YodhDepartment of Physics and Astronomy, University of Pennsylvania, Philadelphia, PA 19104, United States of America.
Children's Hospital of Philadelphia · USUniversity of Pennsylvania · US

Funding

Training in Molecular Therapeutics for Pediatric CardiologyT32HL007915 · NHLBI · CHILDREN'S HOSP OF PHILADELPHIA · PI Robert J Levy, JOSEPH W ROSSANO · 1999 to 2026
$13.4M
Training and DisseminationP41EB015893 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI REDDY, RAVINDER · 2012 to 2019
$11.3M
High Spatial and Temporal Resolution MRI Mapping of Oxygen Consumption in HumansP41EB029460 · NIBIB · UNIVERSITY OF PENNSYLVANIA · PI Ravinder Reddy · 2021 to 2026
$7.6M
Diffuse Optics for Acute Stroke ManagementR01NS060653 · NINDS · UNIVERSITY OF PENNSYLVANIA · PI YODH, ARJUN G. · 2008 to 2018
$5.5M
Injury-Induced Alterations in Limbic Functional CircuityR37HD059288 · NICHD · CHILDREN'S HOSP OF PHILADELPHIA · PI COHEN, AKIVA S · 2014 to 2023
$4.3M
Diffuse Optics for Pediatric Hydrocephalus ManagementR01NS113945 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI BAKER, WESLEY · 2020 to 2024
$1.9M
Optical Functional Neuroimaging of Acute and Chronic HypoxiaK08NS117897 · NINDS · CHILDREN'S HOSP OF PHILADELPHIA · PI WHITE, BRIAN RICHARD · 2020 to 2024
$843k
NHLBI NIH HHS T32 HL007915NIBIB NIH HHS P41 EB015893NIBIB NIH HHS P41 EB029460NICHD NIH HHS R37 HD059288NINDS NIH HHS K08 NS117897NINDS NIH HHS R01 NS060653NINDS NIH HHS R01 NS113945
6 · The paper itself

Abstract

Optical neuromonitoring provides insight into neurovascular physiology and brain structure and function. These methods rely on spectroscopy to relate light absorption changes to variation of concentrations of physiologic chromophores such as oxy- and deoxyhemoglobin. In clinical or preclinical practice, data quality can vary significantly across wavelengths. In such situations, standard spectroscopic methods may perform poorly, resulting in data loss and limiting field-of-view. To address this issue, and thereby improve the robustness of optical neuromonitoring, we develop, in this manuscript, novel methods to perform spectroscopy even when data quality exhibits wavelength-dependent spatial variation. We sought to understand the impact of spatial, wavelength-based censoring on the physiologic accuracy and utility of hemoglobin spectroscopy. The principles of our analysis are quite general, but to make the methodology tangible we focused on optical intrinsic signal imaging of resting-state functional connectivity in mice. Starting with spectroscopy using four sources, all possible subset spectroscopy matrices were assessed theoretically, using simulated data, and using experimental data. These results were compared against the use of the full spectroscopy matrix to determine which subsets yielded robust results. Our results demonstrated that accurate calculation of changes in hemoglobin concentrations and the resulting functional connectivity network maps was possible even with censoring of some wavelengths. Additionally, we found that the use of changes in total hemoglobin (rather than oxy- or deoxyhemoglobin) yielded results more robust to experimental noise and allowed for the preservation of more data. This new and rigorous image processing method should improve the fidelity of clinical and preclinical functional neuroimaging studies.

Indexed as

AnimalsBrainBrain MappingComputer SimulationFunctional NeuroimagingHemoglobinsHumansImage Processing, Computer-AssistedMaleMiceMice, Inbred C57BLOxyhemoglobinsReproducibility of ResultsSpectrum AnalysisdeoxyhemoglobinHemoglobinsOxyhemoglobins

Identifiers

PMID33326946
PMCPMC8059274
OpenAlexW3110670902

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.