Evidence map›Paper›PMID 33324725›Full record

ArticleOpen forum infectious diseases2020

Impact of Acute HIV Infection and Early Antiretroviral Therapy on the Human Gut Microbiome.

Ornella Sortino, Nittaya Phanuphak, Alexandra Schuetz, Alexandra M Ortiz, Nitiya Chomchey, Yasmine Belkaid, Jacquice Davis, Harry A Mystakelis, Mariam Quiñones, Claire Deleage and 9 more

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in Open forum infectious diseases, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
0.9field-weighted citation impact, top 27% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 33 citations in OpenAlex.

  1. Article
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  9. Article
  10. Review
  11. Article
  12. Review
  13. Article
  14. Overamped: Stimulant Use and HIV Pathogenesis.Current HIV/AIDS reports · 2023
    Review
  15. Article
  16. Review
  17. Cardiovascular Disease and Thrombosis in HIV Infection.Arteriosclerosis, thrombosis, and vascular biology · 2023
    Review
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

19 authors at 6 institutions in 3 countries.

Ornella SortinoClinical Research Directorate, Frederick National Laboratory for Cancer Research, sponsored by the National Cancer Institute.
Nittaya PhanuphakSEARCH/Thai Red Cross AIDS Research Centre, Bangkok, Thailand.
Alexandra SchuetzThe Henry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, Maryland.
Alexandra M OrtizNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.
Nitiya ChomcheySEARCH/Thai Red Cross AIDS Research Centre, Bangkok, Thailand.
Yasmine BelkaidMetaorganism Immunity Section, Laboratory of Immune System Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.
Jacquice DavisMicrobiome Program, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.
Harry A MystakelisNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.
Mariam QuiñonesBioinformatics and Computational Biosciences Branch, Office of Cyber Infrastructure and Computational Biology, National Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.
Claire DeleageClinical Research Directorate, Frederick National Laboratory for Cancer Research, sponsored by the National Cancer Institute.
Brian IngramMetabolon, Inc., Research Triangle Park, North Carolina.
Rungsun RerknimitrSEARCH/Thai Red Cross AIDS Research Centre, Bangkok, Thailand.
Suteeraporn PinyakornThe Henry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, Maryland.
Adam RupertClinical Research Directorate, Frederick National Laboratory for Cancer Research, sponsored by the National Cancer Institute.
Merlin L RobbThe Henry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, Maryland.
Jintanat AnanworanichThe Henry M. Jackson Foundation for the Advancement of Military Medicine, Bethesda, Maryland.
Jason BrenchleyNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.
Irini SeretiNational Institute of Allergy and Infectious Diseases, National Institutes of Health, Bethesda, Maryland.
RV254/SEARCH010 Study Group
National Institutes of Health · USHenry M. Jackson Foundation · USThai Red Cross Society · THFrederick National Laboratory for Cancer Research · USLeidos (United States) · USTriangle · US

Funding

CCR NIH HHS HHSN261200800001CNCI NIH HHS HHSN261200800001E
6 · The paper itself

Abstract

Background: Intestinal microbial dysbiosis is evident in chronic HIV-infected individuals and may underlie inflammation that persists even during antiretroviral therapy (ART). It remains unclear, however, how early after HIV infection gut dysbiosis emerges and how it is affected by early ART. Methods: Fecal microbiota were studied by 16s rDNA sequencing in 52 Thai men who have sex with men (MSM), at diagnosis of acute HIV infection (AHI), Fiebig Stages 1-5 (F1-5), and after 6 months of ART initiation, and in 7 Thai MSM HIV-uninfected controls. Dysbiotic bacterial taxa were associated with relevant inflammatory markers. Results: Fecal microbiota profiling of AHI pre-ART vs HIV-uninfected controls showed a mild dysbiosis. Transition from F1-3 of acute infection was characterized by enrichment in pro-inflammatory bacteria. Lower proportions of Bacteroidetes and higher frequencies of Proteobacteria and Fusobacteria members were observed post-ART compared with pre-ART. Fusobacteria members were positively correlated with levels of soluble CD14 in AHI post-ART. Conclusions: Evidence of gut dysbiosis was observed during early acute HIV infection and was partially restored upon early ART initiation. The association of dysbiotic bacterial taxa with inflammatory markers suggests that a potential relationship between altered gut microbiota and systemic inflammation may also be established during AHI.

Indexed as

ARTHIVimmune activationinflammationmicrobiome

Identifiers

PMID33324725
PMCPMC7724511
OpenAlexW2969314846

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.