Evidence map›Paper›PMID 33323971›Full record

ArticleOncogene2021

Induction of APOBEC3B expression by chemotherapy drugs is mediated by DNA-PK-directed activation of NF-κB.

Manikandan Periyasamy, Anup K Singh, Carolina Gemma, Raed Farzan, Rebecca C Allsopp, Jacqueline A Shaw, Sara Charmsaz, Leonie S Young, Paula Cunnea, R Charles Coombes and 3 more

Open access · greenAbstract read
In one paragraph

Article in Oncogene, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.4field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Clinical Implications of APOBEC3-Mediated Mutagenesis in Breast Cancer.Clinical cancer research : an official journal of the American Association for Cancer Research · 2023
    Review
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors at 5 institutions in 4 countries.

Manikandan PeriyasamyDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK.
Anup K SinghDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK.
Carolina GemmaDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK.ORCID http://orcid.org/0000-0002-4890-9972
Raed FarzanDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK.
Rebecca C AllsoppDepartment of Cancer Studies and Cancer Research UK, Leicester Centre, University of Leicester, Leicester, UK.
Jacqueline A ShawDepartment of Cancer Studies and Cancer Research UK, Leicester Centre, University of Leicester, Leicester, UK.ORCID http://orcid.org/0000-0003-4227-503X
Sara CharmsazEndocrine Oncology Research Group, Department of Surgery, Royal College of Surgeons in Ireland, Dublin, Ireland.
Leonie S YoungEndocrine Oncology Research Group, Department of Surgery, Royal College of Surgeons in Ireland, Dublin, Ireland.ORCID http://orcid.org/0000-0002-4904-0367
Paula CunneaDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK.ORCID http://orcid.org/0000-0002-3699-4911
R Charles CoombesDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK.
Balázs GyőrffyDepartment of Bioinformatics and 2nd Department of Pediatrics, Semmelweis University, Budapest, Hungary.
Lakjaya BuluwelaDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK.
Simak AliDepartment of Surgery & Cancer, Imperial College London, London, W12 0NN, UK. simak.ali@imperial.ac.uk.ORCID http://orcid.org/0000-0002-1320-0816
Imperial College London · GBRoyal College of Surgeons in Ireland · IEUniversity of Leicester · GBKing Saud University · SASemmelweis University · HU

Funding

Cancer Research UK 12011Cancer Research UK 18784Cancer Research UK 23464Cancer Research UK A18784
6 · The paper itself

Abstract

The mutagenic APOBEC3B (A3B) cytosine deaminase is frequently over-expressed in cancer and promotes tumour heterogeneity and therapy resistance. Hence, understanding the mechanisms that underlie A3B over-expression is important, especially for developing therapeutic approaches to reducing A3B levels, and consequently limiting cancer mutagenesis. We previously demonstrated that A3B is repressed by p53 and p53 mutation increases A3B expression. Here, we investigate A3B expression upon treatment with chemotherapeutic drugs that activate p53, including 5-fluorouracil, etoposide and cisplatin. Contrary to expectation, these drugs induced A3B expression and concomitant cellular cytosine deaminase activity. A3B induction was p53-independent, as chemotherapy drugs stimulated A3B expression in p53 mutant cells. These drugs commonly activate ATM, ATR and DNA-PKcs. Using specific inhibitors and gene knockdowns, we show that activation of DNA-PKcs and ATM by chemotherapeutic drugs promotes NF-κB activity, with consequent recruitment of NF-κB to the A3B gene promoter to drive A3B expression. Further, we find that A3B knockdown re-sensitises resistant cells to cisplatin, and A3B knockout enhances sensitivity to chemotherapy drugs. Our data highlight a role for A3B in resistance to chemotherapy and indicate that stimulation of A3B expression by activation of DNA repair and NF-κB pathways could promote cancer mutations and expedite chemoresistance.

Indexed as

Ataxia Telangiectasia Mutated ProteinsCisplatinCRISPR-Cas SystemsCytidine DeaminaseDNA RepairEtoposideFluorouracilGene Expression Regulation, NeoplasticGenetic HeterogeneityHCT116 CellsHumansMCF-7 CellsMinor Histocompatibility AntigensMutationNeoplasmsNF-kappa BAPOBEC3B protein, humanAtaxia Telangiectasia Mutated ProteinsCisplatinCytidine DeaminaseEtoposideFluorouracilMinor Histocompatibility AntigensNF-kappa BRELA protein, humanTP53 protein, humanTranscription Factor RelATumor Suppressor Protein p53

Identifiers

PMID33323971
PMCPMC7116738
OpenAlexW3115484227

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.