Evidence map›Paper›PMID 33322722›Full record

ArticleBiomolecules2020

Impact of Sucrose as Osmolyte on Molecular Dynamics of Mouse Acetylcholinesterase.

Sofya V Lushchekina, Gaetan Inidjel, Nicolas Martinez, Patrick Masson, Marie Trovaslet-Leroy, Florian Nachon, Michael Marek Koza, Tilo Seydel, Judith Peters

Open access · goldAbstract read
In one paragraph

Article in Biomolecules, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 14 citations in OpenAlex.

  1. Osmolyte-induced protein stability changes explained by graph theory.Computational and structural biotechnology journal · 2024
    Article
  2. Article
  3. Review
  4. Article
  5. Cholinesterase Research.Biomolecules · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Sofya V LushchekinaN.M. Emanuel Institute of Biochemical Physics, Russian Academy of Sciences, 119334 Moscow, Russia.ORCID 0000-0002-6922-020X
Gaetan InidjelInstitut Laue Langevin, 38000 Grenoble, France.
Nicolas MartinezInstitut Laue Langevin, 38000 Grenoble, France.
Patrick MassonNeuropharmacology Laboratory, Kazan Federal University, Kremlevskaya str 18, 480002 Kazan, Russia.
Marie Trovaslet-LeroyInstitut de Recherche Biomédicale des Armées, 91223 Brétigny sur Orge, France.
Florian NachonInstitut de Recherche Biomédicale des Armées, 91223 Brétigny sur Orge, France.ORCID 0000-0003-0293-2429
Michael Marek KozaInstitut Laue Langevin, 38000 Grenoble, France.
Tilo SeydelInstitut Laue Langevin, 38000 Grenoble, France.ORCID 0000-0001-9630-1630
Judith PetersInstitut Laue Langevin, 38000 Grenoble, France.ORCID 0000-0001-5151-7710
Centre National de la Recherche Scientifique · FRInstitut Laue-Langevin · FRInstitute of Biochemical Physics NM Emanuel · RUKazan Federal University · RU

Funding

Direction générale de l'armement et Service de Santé des Armées BIOMDEF PDH-2-NRBC-3-C-301Russian Science Foundation 20-14-00155
6 · The paper itself

Abstract

The enzyme model, mouse acetylcholinesterase, which exhibits its active site at the bottom of a narrow gorge, was investigated in the presence of different concentrations of sucrose to shed light on the protein and water dynamics in cholinesterases. The study was conducted by incoherent neutron scattering, giving access to molecular dynamics within the time scale of sub-nano to nanoseconds, in comparison with molecular dynamics simulations. With increasing sucrose concentration, we found non-linear effects, e.g., first a decrease in the dynamics at 5 wt% followed by a gain at 10 wt% sucrose. Direct comparisons with simulations permitted us to understand the following findings: at 5 wt%, sugar molecules interact with the protein surface through water molecules and damp the motions to reduce the overall protein mobility, although the motions inside the gorge are enhanced due to water depletion. When going to 10 wt% of sucrose, some water molecules at the protein surface are replaced by sugar molecules. By penetrating the protein surface, they disrupt some of the intra-protein contacts, and induce new ones, creating new pathways for correlated motions, and therefore, increasing the dynamics. This exhaustive study allowed for an explanation of the detail interactions leading to the observed non-linear behavior.

Indexed as

Molecular Dynamics SimulationOsmosisAcetylcholinesteraseAnimalsMiceNeutronsSucroseTemperatureAcetylcholinesteraseSucrosecholinesteraseMD simulationsmolecular dynamicsneutron scatteringosmotic stress

Identifiers

PMID33322722
PMCPMC7763276
OpenAlexW3110976257

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.