Evidence map›Paper›PMID 33322276›Full record

ArticlePathogens (Basel, Switzerland)2020

Evaluation of West Nile Virus Diagnostic Capacities in Veterinary Laboratories of the Mediterranean and Black Sea Regions.

Elisa Pérez-Ramírez, Cristina Cano-Gómez, Francisco Llorente, Ani Vodica, Ljubiša Veljović, Natela Toklikishvilli, Kurtesh Sherifi, Soufien Sghaier, Amel Omani, Aida Kustura and 10 more

Open access · goldAbstract read
In one paragraph

Article in Pathogens (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.1field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 8 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Article
  5. West Nile Virus Infection.Pathogens (Basel, Switzerland) · 2023
    Article
  6. Article
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 9 institutions in 9 countries.

Elisa Pérez-RamírezCentro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CISA), 28130 Valdeolmos, Spain.
Cristina Cano-GómezCentro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CISA), 28130 Valdeolmos, Spain.ORCID 0000-0003-4979-983X
Francisco LlorenteCentro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CISA), 28130 Valdeolmos, Spain.
Ani VodicaDepartment of Animal Health, Food Safety and Veterinary Institute, Tirana, Albania.
Ljubiša VeljovićVirology Department, Scientific Institute of Veterinary Medicine of Serbia, 11000 Belgrade, Serbia.
Natela ToklikishvilliLaboratory of Virology and Molecular Biology, LEPL State Laboratory of Agriculture (SLA), 0159 Tbilisi, Georgia.
Kurtesh SherifiDepartment of Veterinary Medicine, Faculty of Agriculture and Veterinary Sciences, University of Prishtina "Hasan Pristhina", 10000 Prishtine, Kosovo.
Soufien SghaierVirology Department, Institute of Veterinary Research of Tunisia, 1006 Tunis, Tunisia.ORCID 0000-0003-3608-9919
Amel OmaniLaboratoire Central Vétérinaire d'Alger, Institut National de la Médecine Vétérinaire, Algiers, Algeria.
Aida KusturaVeterinary Faculty, University of Sarajevo, 71000 Sarajevo, Bosnia and Herzegovina.ORCID 0000-0003-0261-8771
Kiril KrstevskiFaculty of Veterinary Medicine, Ss. Cyril and Methodius University, 1000 Skopje, North Macedonia.
Ilke Karayel-HaciogluVirology Department, Faculty of Veterinary Medicine, Ankara University, 06110 Ankara, Turkey.ORCID 0000-0003-1566-630X
Naglaa Mohamed HagagAnimal Health Research Institute, Dokki 12618, Egypt.
Jeanne El HageAnimal Health Laboratory, Lebanese Agricultural Research Institute, 90-1064 Fanar, Lebanon.ORCID 0000-0001-7910-8345
Hasmik DavdyanRepublican Veterinary-Sanitary and Phytosanitary Center of Laboratory Services SNCO, Yerevan, Armenia.
Mohd Saddam BintarifAnimal Wealth Laboratory Sector, Ministry of Agriculture, Amman, Jordan.
Bojan AdzicDiagnostic Veterinary Laboratory, 81000 Podgorica, Montenegro.
Nabil AbouchoaibCasablanca Regional Research and Analysis Laboratory of National Office of Sanitary Safety and Food Products (ONSSA), Nouaceur, 20 000 Casablanca, Morocco.
Miguel Ángel Jiménez-ClaveroCentro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CISA), 28130 Valdeolmos, Spain.ORCID 0000-0003-2125-9743
Jovita Fernández-PineroCentro de Investigación en Sanidad Animal, Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria (INIA-CISA), 28130 Valdeolmos, Spain.
Instituto Nacional de Investigación y Tecnología Agraria y Alimentaria · ESAnkara University · TRHigher National Veterinary School · DZLebanese Agricultural Research Institute · LBScientific Institute for Veterinary Medicine of Serbia · RSSs. Cyril and Methodius University in Skopje · MKUniversity of Montenegro · MEUniversity of Prishtina · XKUniversity of Sarajevo · BA

Funding

Directorate-General for International Cooperation and Development IFS/21010/23/-194 and 2018/402-247
6 · The paper itself

Abstract

The increasing incidence of West Nile virus (WNV) in the Euro-Mediterranean area warrants the implementation of effective surveillance programs in animals. A crucial step in the fight against the disease is the evaluation of the capacity of the veterinary labs to accurately detect the infection in animal populations. In this context, the animal virology network of the MediLabSecure project organized an external quality assessment (EQA) to evaluate the WNV molecular and serological diagnostic capacities of beneficiary veterinary labs. Laboratories from 17 Mediterranean and Black Sea countries participated. The results of the triplex real time RT-PCR for simultaneous detection and differentiation of WNV lineage 1 (L1), lineage 2 (L2) and Usutu virus (USUV) were highly satisfactory, especially for L1 and L2, with detection rates of 97.9% and 100%, respectively. For USUV, 75% of the labs reported correct results. More limitations were observed for the generic detection of flaviviruses using conventional reverse-transcription polymerase chain reaction (RT-PCR), since only 46.1% reported correct results in the whole panel. As regards the serological panel, the results were excellent for the generic detection of WNV antibodies. More variability was observed for the specific detection of IgM antibodies with a higher percentage of incorrect results mainly in samples with low titers. This EQA provides a good overview of the WNV (and USUV) diagnostic performance of the involved veterinary labs and demonstrates that the implemented training program was successful in upgrading their diagnostic capacities.

Indexed as

diagnosticsELISAexternal quality assessment (EQA)flavivirusMediLabSecurePCRUsutu virus (USUV)West Nile virus (WNV)

Identifiers

PMID33322276
PMCPMC7763240
OpenAlexW3113307291

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.