Evidence map›Paper›PMID 33322028›Full record

ArticlePlants (Basel, Switzerland)2020

Identification of Cis-Regulatory Sequences Controlling Pollen-Specific Expression of Hydroxyproline-Rich Glycoprotein Genes in

Yichao Li, Maxwell Mullin, Yingnan Zhang, Frank Drews, Lonnie R Welch, Allan M Showalter

Open access · goldAbstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.9field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 11 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. The lncRNAPlant signaling & behavior · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Yichao LiSchool of Electrical Engineering and Computer Science, Russ College of Engineering, Ohio University, Athens, OH 45701, USA.ORCID 0000-0001-5791-096X
Maxwell MullinSchool of Electrical Engineering and Computer Science, Russ College of Engineering, Ohio University, Athens, OH 45701, USA.
Yingnan ZhangSchool of Electrical Engineering and Computer Science, Russ College of Engineering, Ohio University, Athens, OH 45701, USA.
Frank DrewsSchool of Electrical Engineering and Computer Science, Russ College of Engineering, Ohio University, Athens, OH 45701, USA.
Lonnie R WelchSchool of Electrical Engineering and Computer Science, Russ College of Engineering, Ohio University, Athens, OH 45701, USA.
Allan M ShowalterDepartment of Environmental and Plant Biology, Molecular and Cellular Biology Program, College of Arts and Sciences, Ohio University, Athens, OH 45701, USA.ORCID 0000-0003-0775-4991
Ohio University · US

Funding

Ohio University 10-100000-140930-0000-20
6 · The paper itself

Abstract

Hydroxyproline-rich glycoproteins (HRGPs) are a superfamily of plant cell wall structural proteins that function in various aspects of plant growth and development, including pollen tube growth. We have previously characterized protein sequence signatures for three family members in the HRGP superfamily: the hyperglycosylated arabinogalactan-proteins (AGPs), the moderately glycosylated extensins (EXTs), and the lightly glycosylated proline-rich proteins (PRPs). However, the mechanism of pollen-specific HRGP gene expression remains unexplored. To this end, we developed an integrative analysis pipeline combining RNA-seq gene expression and promoter sequences to identify cis-regulatory motifs responsible for pollen-specific expression of HRGP genes in

Indexed as

cis-regulatory motifshydroxyproline-rich glycoproteinsmachine learningpollen-specifictissue-specific expression

Identifiers

PMID33322028
PMCPMC7763877
OpenAlexW3112526696

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.