Evidence map›Paper›PMID 33320907›Full record

ArticlePLoS pathogens2020

Emergence of artemisinin-resistant Plasmodium falciparum with kelch13 C580Y mutations on the island of New Guinea.

Olivo Miotto, Makoto Sekihara, Shin-Ichiro Tachibana, Masato Yamauchi, Richard D Pearson, Roberto Amato, Sonia Gonçalves, Somya Mehra, Rintis Noviyanti, Jutta Marfurt and 15 more

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 70 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
70citing papers in PubMed, 1 pooled it
22.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

70 citing papers in PubMed, 1 synthesis or guideline pooled it, 164 citations in OpenAlex.

  1. Pooled it
  2. Trial
  3. Trial
  4. Antibody Responses to the ConservedPathogens (Basel, Switzerland) · 2026
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  7. Polymorphism ofJournal of parasitology research · 2026
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  9. Global assessment of partial artemisinin resistance: multicenter trial across Kenya, Peru, and Thailand in patients with uncomplicated Plasmodium falciparum malaria.International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases · 2025
    Article
  10. Article
  11. Article
  12. Article
  13. Population genetics ofFrontiers in genetics · 2025
    Article
  14. Artemisinin-resistant malaria.Clinical microbiology reviews · 2024
    Review
  15. Review
  16. Article
  17. Article
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  19. Review
  20. Article

10 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors at 12 institutions in 7 countries.

Olivo MiottoMRC Centre for Genomics and Global Health, Big Data Institute, University of Oxford, Oxford, United Kingdom.ORCID 0000-0001-8060-6771
Makoto SekiharaDepartment of Tropical Medicine and Parasitology, Juntendo University Faculty of Medicine, Tokyo, Japan.
Shin-Ichiro TachibanaDepartment of Tropical Medicine and Parasitology, Juntendo University Faculty of Medicine, Tokyo, Japan.ORCID 0000-0001-5204-0336
Masato YamauchiDepartment of Tropical Medicine and Parasitology, Juntendo University Faculty of Medicine, Tokyo, Japan.
Richard D PearsonMRC Centre for Genomics and Global Health, Big Data Institute, University of Oxford, Oxford, United Kingdom.ORCID 0000-0002-7386-3566
Roberto AmatoWellcome Sanger Institute, Hinxton, United Kingdom.ORCID 0000-0001-8633-9221
Sonia GonçalvesWellcome Sanger Institute, Hinxton, United Kingdom.ORCID 0000-0003-0321-3303
Somya MehraWalter and Eliza Hall Institute of Medical Research, Melbourne, Australia.ORCID 0000-0002-0507-3204
Rintis NoviyantiEijkman Institute for Molecular Biology, Jakarta, Indonesia.ORCID 0000-0003-1383-3274
Jutta MarfurtGlobal and Tropical Health Division, Menzies School of Health Research and Charles Darwin University, Darwin, Australia.
Sarah AuburnMahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.ORCID 0000-0002-4638-536X
Ric N PriceMahidol-Oxford Tropical Medicine Research Unit, Mahidol University, Bangkok, Thailand.ORCID 0000-0003-2000-2874
Ivo MuellerWalter and Eliza Hall Institute of Medical Research, Melbourne, Australia.
Mie IkedaDepartment of Tropical Medicine and Parasitology, Juntendo University Faculty of Medicine, Tokyo, Japan.
Toshiyuki MoriDepartment of Tropical Medicine and Parasitology, Juntendo University Faculty of Medicine, Tokyo, Japan.ORCID 0000-0001-8751-4562
Makoto HiraiDepartment of Tropical Medicine and Parasitology, Juntendo University Faculty of Medicine, Tokyo, Japan.
Livingstone TavulPapua New Guinea Institute of Medical Research, Madang, Papua New Guinea.ORCID 0000-0002-7962-4320
Manuel W HetzelSwiss Tropical and Public Health Institute, Basel, Switzerland.ORCID 0000-0002-5285-3254
Moses LamanPapua New Guinea Institute of Medical Research, Madang, Papua New Guinea.ORCID 0000-0003-0964-805X
Alyssa E BarryWalter and Eliza Hall Institute of Medical Research, Melbourne, Australia.ORCID 0000-0002-1189-2310
Pascal RingwaldWorld Health Organization, Geneva, Switzerland.
Jun OhashiDepartment of Biological Sciences, Graduate School of Science, University of Tokyo, Tokyo, Japan.
Francis HombhanjeCentre for Health Research & Diagnostics, Divine Word University, Madang, Papua New Guinea.
Dominic P KwiatkowskiMRC Centre for Genomics and Global Health, Big Data Institute, University of Oxford, Oxford, United Kingdom.ORCID 0000-0002-5023-0176
Toshihiro MitaDepartment of Tropical Medicine and Parasitology, Juntendo University Faculty of Medicine, Tokyo, Japan.ORCID 0000-0001-8180-2344
Juntendo University · JPCentre for Human Genetics · GBMahidol University · THPapua New Guinea Institute of Medical Research · PGWalter and Eliza Hall Institute of Medical Research · AUWellcome Sanger Institute · GBBurnet Institute · AUCharles Darwin University · AUDivine Word University · PGEijkman Institute for Molecular Biology · IDSwiss Tropical and Public Health Institute · CHWorld Health Organization · CH

Funding

Medical Research Council G0600718Medical Research Council MR/M006212/1Wellcome Trust 090770/Z/09/ZWellcome Trust 204911/Z/16/ZWellcome Trust 206194World Health Organization 001
6 · The paper itself

Abstract

The rapid and aggressive spread of artemisinin-resistant Plasmodium falciparum carrying the C580Y mutation in the kelch13 gene is a growing threat to malaria elimination in Southeast Asia, but there is no evidence of their spread to other regions. We conducted cross-sectional surveys in 2016 and 2017 at two clinics in Wewak, Papua New Guinea (PNG) where we identified three infections caused by C580Y mutants among 239 genotyped clinical samples. One of these mutants exhibited the highest survival rate (6.8%) among all parasites surveyed in ring-stage survival assays (RSA) for artemisinin. Analyses of kelch13 flanking regions, and comparisons of deep sequencing data from 389 clinical samples from PNG, Indonesian Papua and Western Cambodia, suggested an independent origin of the Wewak C580Y mutation, showing that the mutants possess several distinctive genetic features. Identity by descent (IBD) showed that multiple portions of the mutants' genomes share a common origin with parasites found in Indonesian Papua, comprising several mutations within genes previously associated with drug resistance, such as mdr1, ferredoxin, atg18 and pnp. These findings suggest that a P. falciparum lineage circulating on the island of New Guinea has gradually acquired a complex ensemble of variants, including kelch13 C580Y, which have affected the parasites' drug sensitivity. This worrying development reinforces the need for increased surveillance of the evolving parasite populations on the island, to contain the spread of resistance.

Indexed as

Anti-Infective AgentsArtemisininsCross-Sectional StudiesDrug ResistanceGenes, ProtozoanHumansMalaria, FalciparumMutationPapua New GuineaPlasmodium falciparumAnti-Infective AgentsartemisininArtemisinins

Identifiers

PMID33320907
PMCPMC7771869
OpenAlexW3111092679

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.