Evidence map›Paper›PMID 33318495›Full record

Trial reportScientific reports2020

Effectiveness of transfer learning for enhancing tumor classification with a convolutional neural network on frozen sections.

Young-Gon Kim, Sungchul Kim, Cristina Eunbee Cho, In Hye Song, Hee Jin Lee, Soomin Ahn, So Yeon Park, Gyungyub Gong, Namkug Kim

Open access · goldAbstract readClinical TrialMulticenter Study
In one paragraph

Trial report in Scientific reports, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.

0numbers the graph read from it
0cells of the map it votes in
29citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

29 citing papers in PubMed, 63 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 6 institutions in 1 country.

Young-Gon KimTransdisciplinary Department of Medicine & Advanced Technology, Seoul National University Hospital, Seoul, 03080, Korea.
Sungchul KimDepartment of Convergence Medicine, Asan Institute of Life Science, University of Ulsan College of Medicine, Asan Medical Center, Seoul, 05505, Korea.
Cristina Eunbee ChoDepartment of Convergence Medicine, Asan Institute of Life Science, University of Ulsan College of Medicine, Asan Medical Center, Seoul, 05505, Korea.
In Hye SongDepartment of Hospital Pathology, Seoul St. Mary's Hospital, College of Medicine, The Catholic University of Korea, Seoul, 06591, Korea.
Hee Jin LeeDepartment of Pathology, University of Ulsan, College of Medicine, Asan Medical Center, Seoul, 05505, Korea.
Soomin AhnDepartment of Pathology, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Gyeonggi, 13620, Korea.
So Yeon ParkDepartment of Pathology, Seoul National University Bundang Hospital, Seoul National University College of Medicine, Gyeonggi, 13620, Korea.
Gyungyub GongDepartment of Pathology, University of Ulsan, College of Medicine, Asan Medical Center, Seoul, 05505, Korea.
Namkug KimDepartment of Convergence Medicine, Asan Institute of Life Science, University of Ulsan College of Medicine, Asan Medical Center, Seoul, 05505, Korea. namkugkim@gmail.com.
Asan Medical Center · KRSeoul National University Bundang Hospital · KRUniversity of Ulsan · KRSeoul National University Hospital · KRThe Catholic University of Korea Seoul St. Mary's Hospital · KRUlsan College · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Fast and accurate confirmation of metastasis on the frozen tissue section of intraoperative sentinel lymph node biopsy is an essential tool for critical surgical decisions. However, accurate diagnosis by pathologists is difficult within the time limitations. Training a robust and accurate deep learning model is also difficult owing to the limited number of frozen datasets with high quality labels. To overcome these issues, we validated the effectiveness of transfer learning from CAMELYON16 to improve performance of the convolutional neural network (CNN)-based classification model on our frozen dataset (N = 297) from Asan Medical Center (AMC). Among the 297 whole slide images (WSIs), 157 and 40 WSIs were used to train deep learning models with different dataset ratios at 2, 4, 8, 20, 40, and 100%. The remaining, i.e., 100 WSIs, were used to validate model performance in terms of patch- and slide-level classification. An additional 228 WSIs from Seoul National University Bundang Hospital (SNUBH) were used as an external validation. Three initial weights, i.e., scratch-based (random initialization), ImageNet-based, and CAMELYON16-based models were used to validate their effectiveness in external validation. In the patch-level classification results on the AMC dataset, CAMELYON16-based models trained with a small dataset (up to 40%, i.e., 62 WSIs) showed a significantly higher area under the curve (AUC) of 0.929 than those of the scratch- and ImageNet-based models at 0.897 and 0.919, respectively, while CAMELYON16-based and ImageNet-based models trained with 100% of the training dataset showed comparable AUCs at 0.944 and 0.943, respectively. For the external validation, CAMELYON16-based models showed higher AUCs than those of the scratch- and ImageNet-based models. Model performance for slide feasibility of the transfer learning to enhance model performance was validated in the case of frozen section datasets with limited numbers.

Indexed as

Frozen SectionsImage Interpretation, Computer-AssistedNeoplasmsNeural Networks, ComputerAdultAgedAged, 80 and overFemaleHumansLymphatic MetastasisMaleMiddle AgedRetrospective StudiesSentinel Lymph Node Biopsy

Identifiers

PMID33318495
PMCPMC7736325
OpenAlexW3112995972

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.