Evidence map›Paper›PMID 33318168›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Mirror-image antiparallel β-sheets organize water molecules into superstructures of opposite chirality.

Ethan A Perets, Daniel Konstantinovsky, Li Fu, Jiantao Chen, Hong-Fei Wang, Sharon Hammes-Schiffer, Elsa C Y Yan

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Stepwise Hydration Reveals Conformational Switching in Chiral Prolinol.Journal of the American Chemical Society · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Characterizing Interfaces by Voronoi Tessellation.The journal of physical chemistry letters · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Handy water: Chiral superstructures around peptide β-sheets.Proceedings of the National Academy of Sciences of the United States of America · 2021
    Article
  15. Mirror-image antiparallel β-sheets organize water molecules into superstructures of opposite chirality.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Ethan A PeretsDepartment of Chemistry, Yale University, New Haven, CT 06520.ORCID 0000-0001-9554-776X
Daniel KonstantinovskyDepartment of Chemistry, Yale University, New Haven, CT 06520.
Li FuDepartment of Chemistry, Yale University, New Haven, CT 06520.
Jiantao ChenDepartment of Chemistry, Yale University, New Haven, CT 06520.
Hong-Fei WangDepartment of Chemistry and Shanghai Key Laboratory of Molecular Catalysis and Innovative Materials, Fudan University, Shanghai 200433, China.ORCID 0000-0001-8238-1641
Sharon Hammes-SchifferDepartment of Chemistry, Yale University, New Haven, CT 06520; sharon.hammes-schiffer@yale.edu elsa.yan@yale.edu.ORCID 0000-0002-3782-6995
Elsa C Y YanDepartment of Chemistry, Yale University, New Haven, CT 06520; sharon.hammes-schiffer@yale.edu elsa.yan@yale.edu.ORCID 0000-0002-3583-1627

Funding

PREDOCTORAL PROGRAM IN BIOPHYSICST32GM008283 · NIGMS · YALE UNIVERSITY · PI XIONG, YONG · 1988 to 2022
$10.5M
Simulation of Proton and Hydride Transfer in EnzymesR37GM056207 · NIGMS · YALE UNIVERSITY · PI HAMMES-SCHIFFER, SHARON · 2011 to 2020
$3.2M
SIMULATION OF PROTON AND HYDRIDE TRANSFER IN ENZYMESR01GM056207 · NIGMS · UNIVERSITY OF NOTRE DAME · PI HAMMES-SCHIFFER, SHARON · 1998 to 2010
$2.7M
NIGMS NIH HHS R01 GM056207NIGMS NIH HHS R37 GM056207NIGMS NIH HHS T32 GM008283
6 · The paper itself

Abstract

Biomolecular hydration is fundamental to biological functions. Using phase-resolved chiral sum-frequency generation spectroscopy (SFG), we probe molecular architectures and interactions of water molecules around a self-assembling antiparallel β-sheet protein. We find that the phase of the chiroptical response from the O-H stretching vibrational modes of water flips with the absolute chirality of the (l-) or (d-) antiparallel β-sheet. Therefore, we can conclude that the (d-) antiparallel β-sheet organizes water solvent into a chiral supermolecular structure with opposite handedness relative to that of the (l-) antiparallel β-sheet. We use molecular dynamics to characterize the chiral water superstructure at atomic resolution. The results show that the macroscopic chirality of antiparallel β-sheets breaks the symmetry of assemblies of surrounding water molecules. We also calculate the chiral SFG response of water surrounding (l-) and (d-) LK

Indexed as

Hydrophobic and Hydrophilic InteractionsMolecular Dynamics SimulationIsomerismLeucineLysineOligopeptidesProtein Conformation, beta-StrandProtein FoldingProtein MultimerizationWaterLeucineLysineOligopeptidesWaterchiral SFGhydrationinterfacesproteinwater

Identifiers

PMID33318168
PMCPMC7776912

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.