Evidence map›Paper›PMID 33317061›Full record

ArticleInternational journal of molecular sciences2020

Differential RNA Editing and Intron Splicing in Soybean Mitochondria during Nodulation.

Yuzhe Sun, Min Xie, Zhou Xu, Koon Chuen Chan, Jia Yi Zhong, Kejing Fan, Johanna Wong-Bajracharya, Hon-Ming Lam, Boon Leong Lim

Open access · goldAbstract read
In one paragraph

Article in International journal of molecular sciences, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.7field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Organelle Genetics in Plants.International journal of molecular sciences · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Yuzhe SunSchool of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, China.
Min XieCenter for Soybean Research of the State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China.ORCID 0000-0002-5652-5039
Zhou XuSchool of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, China.
Koon Chuen ChanSchool of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, China.
Jia Yi ZhongSchool of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, China.
Kejing FanCenter for Soybean Research of the State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China.
Johanna Wong-BajracharyaCenter for Soybean Research of the State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China.
Hon-Ming LamCenter for Soybean Research of the State Key Laboratory of Agrobiotechnology, The Chinese University of Hong Kong, Shatin, Hong Kong, China.ORCID 0000-0002-6673-8740
Boon Leong LimSchool of Biological Sciences, University of Hong Kong, Pokfulam, Hong Kong, China.ORCID 0000-0002-2720-2353
Chinese University of Hong Kong · HKUniversity of Hong Kong · HK

Funding

Innovation and Technology Fund of the HKSAR Funding Support to State Key Laboratory of AgrobiotechnologyResearch Grants Council, University Grants Committee AoE/M-403/16
6 · The paper itself

Abstract

Nitrogen fixation in soybean consumes a tremendous amount of energy, leading to substantial differences in energy metabolism and mitochondrial activities between nodules and uninoculated roots. While C-to-U RNA editing and intron splicing of mitochondrial transcripts are common in plant species, their roles in relation to nodule functions are still elusive. In this study, we performed RNA-seq to compare transcript profiles and RNA editing of mitochondrial genes in soybean nodules and roots. A total of 631 RNA editing sites were identified on mitochondrial transcripts, with 12% or 74 sites differentially edited among the transcripts isolated from nodules, stripped roots, and uninoculated roots. Eight out of these 74 differentially edited sites are located on the

Indexed as

RNA SplicingGene Expression Regulation, PlantGlycine maxIntronsMitochondriaRoot Nodules, PlantTranscriptomecomplex Iintron splicingmaturasemitochondriaNDHRNA editing

Identifiers

PMID33317061
PMCPMC7764374
OpenAlexW3113263261

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.