Evidence map›Paper›PMID 33315086›Full record

ArticleThe Journal of experimental medicine2021

ERCC1 mutations impede DNA damage repair and cause liver and kidney dysfunction in patients.

Katja Apelt, Susan M White, Hyun Suk Kim, Jung-Eun Yeo, Angela Kragten, Annelotte P Wondergem, Martin A Rooimans, Román González-Prieto, Wouter W Wiegant, Sebastian Lunke and 10 more

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of experimental medicine, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 34 citations in OpenAlex.

  1. Article
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  5. Article
  6. Clinical and genetic analysis ofFrontiers in genetics · 2025
    Article
  7. Review
  8. Chronic kidney disease in children: an update.Clinical kidney journal · 2023
    Review
  9. Article
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  11. Article
  12. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors at 6 institutions in 4 countries.

Katja Apelt *Department of Human Genetics, Leiden University Medical Center, Leiden, Netherlands.
Susan M White *Victorian Clinical Genetics Services, Murdoch Children's Research Institute, Parkville, Australia.
Hyun Suk KimCenter for Genomic Integrity, Institute for Basic Science, Ulsan, Republic of Korea.
Jung-Eun YeoCenter for Genomic Integrity, Institute for Basic Science, Ulsan, Republic of Korea.
Angela KragtenDepartment of Human Genetics, Leiden University Medical Center, Leiden, Netherlands.
Annelotte P WondergemDepartment of Human Genetics, Leiden University Medical Center, Leiden, Netherlands.
Martin A RooimansSection of Oncogenetics, Department of Clinical Genetics, Vrije Universiteit Medical Center and Cancer Center Amsterdam, Amsterdam, Netherlands.
Román González-PrietoDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, Netherlands.
Wouter W WiegantDepartment of Human Genetics, Leiden University Medical Center, Leiden, Netherlands.
Sebastian LunkeVictorian Clinical Genetics Services, Murdoch Children's Research Institute, Parkville, Australia.
Daniel FlanaganVictorian Clinical Genetics Services, Murdoch Children's Research Institute, Parkville, Australia.
Sarah PantaleoVictorian Clinical Genetics Services, Murdoch Children's Research Institute, Parkville, Australia.
Catherine QuinlanDepartment of Paediatrics, University of Melbourne, Parkville, Australia.
Winita HardikarDepartment of Paediatrics, University of Melbourne, Parkville, Australia.
Haico van AttikumDepartment of Human Genetics, Leiden University Medical Center, Leiden, Netherlands.
Alfred C O VertegaalDepartment of Cell and Chemical Biology, Leiden University Medical Center, Leiden, Netherlands.
Brian T WilsonInstitute of Genetic Medicine, Newcastle University, International Centre for Life, Newcastle upon Tyne, UK.
Rob M F WolthuisSection of Oncogenetics, Department of Clinical Genetics, Vrije Universiteit Medical Center and Cancer Center Amsterdam, Amsterdam, Netherlands.
Orlando D SchärerCenter for Genomic Integrity, Institute for Basic Science, Ulsan, Republic of Korea.
Martijn S LuijsterburgDepartment of Human Genetics, Leiden University Medical Center, Leiden, Netherlands.
Leiden University Medical Center · NLInstitute for Basic Science · KRRoyal Children's Hospital · AUThe University of Melbourne · AUVictorian Clinical Genetics Services · AUNational Health Service · GB

Funding

Transcription-Coupled & Replication-Associated Excision RepairP01CA092584 · NCI · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI WALTER J. CHAZIN · 2001 to 2026
$89.6M
The XPA scaffold protein in Nucleotide Excision RepairR01CA218315 · NCI · VANDERBILT UNIVERSITY · PI WALTER J. CHAZIN · 2018 to 2026
$3.4M
European Research Council 310913NCI NIH HHS P01 CA092584NCI NIH HHS R01 CA218315
6 · The paper itself

Abstract

ERCC1-XPF is a multifunctional endonuclease involved in nucleotide excision repair (NER), interstrand cross-link (ICL) repair, and DNA double-strand break (DSB) repair. Only two patients with bi-allelic ERCC1 mutations have been reported, both of whom had features of Cockayne syndrome and died in infancy. Here, we describe two siblings with bi-allelic ERCC1 mutations in their teenage years. Genomic sequencing identified a deletion and a missense variant (R156W) within ERCC1 that disrupts a salt bridge below the XPA-binding pocket. Patient-derived fibroblasts and knock-in epithelial cells carrying the R156W substitution show dramatically reduced protein levels of ERCC1 and XPF. Moreover, mutant ERCC1 weakly interacts with NER and ICL repair proteins, resulting in diminished recruitment to DNA damage. Consequently, patient cells show strongly reduced NER activity and increased chromosome breakage induced by DNA cross-linkers, while DSB repair was relatively normal. We report a new case of ERCC1 deficiency that severely affects NER and considerably impacts ICL repair, which together result in a unique phenotype combining short stature, photosensitivity, and progressive liver and kidney dysfunction.

Indexed as

AllelesAmino Acid SubstitutionBase SequenceCell LineCytoplasmDNA-Binding ProteinsDNA Breaks, Double-StrandedDNA DamageDNA RepairEndonucleasesFibroblastsHumansKidneyLightLiverMutant ProteinsDNA-Binding ProteinsEndonucleasesERCC1 protein, humanMutant Proteinsxeroderma pigmentosum group F protein

Identifiers

PMID33315086
PMCPMC7927433
OpenAlexW3111990475

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.