Evidence map›Paper›PMID 33315013›Full record

ArticleeLife2020

Cardiac endothelial cells maintain open chromatin and expression of cardiomyocyte myofibrillar genes.

Nora Yucel, Jessie Axsom, Yifan Yang, Li Li, Joshua H Rhoades, Zoltan Arany

Open access · goldAbstract read
In one paragraph

Article in eLife, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
1.9field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 35 citations in OpenAlex.

  1. Article
  2. Review
  3. Cardiac epigenome in heart development and disease.Nature reviews. Cardiology · 2026
    Review
  4. Review
  5. Article
  6. Distinct endothelial gene responses to acute exercise in skeletal muscle.American journal of physiology. Endocrinology and metabolism · 2025
    Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Control of cardiac contractions using Cre-lox and degron strategies in zebrafish.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  13. Review
  14. Article
  15. Review
  16. Endothelial Lipid Metabolism.Cold Spring Harbor perspectives in medicine · 2022
    Review
  17. Beyond Static Pipes: Mechanisms and In Vitro Models of Vascular Aging.Cold Spring Harbor perspectives in medicine · 2022
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Nora YucelPerelman School of Medicine, University of Pennsylvania, Philadelphia, United States.ORCID 0000-0002-1848-6462
Jessie AxsomPerelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Yifan YangPerelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Li LiPerelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Joshua H RhoadesPerelman School of Medicine, University of Pennsylvania, Philadelphia, United States.
Zoltan AranyPerelman School of Medicine, University of Pennsylvania, Philadelphia, United States.ORCID 0000-0003-1368-2453
University of Pennsylvania · US

Funding

Diabetes, Endocrine, and MetabolismT32DK007314 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI DORIS A STOFFERS, Patrick Seale · 1986 to 2026
$9.0M
Keeping fat out of muscle - Role of Branched Amino AcidsAmino Acids in Insulin ResistanceR01DK114103 · NIDDK · UNIVERSITY OF PENNSYLVANIA · PI Zoltan P Arany · 2018 to 2026
$4.5M
Branched chain amino acids in heart failureR01HL152446 · NHLBI · UNIVERSITY OF PENNSYLVANIA · PI Zoltan P Arany · 2020 to 2026
$3.7M
NHLBI NIH HHS R01 HL152446NIDDK NIH HHS R01 DK114103NIDDK NIH HHS T32 DK007314NIH HHS T32 DKO7314
6 · The paper itself

Abstract

Endothelial cells (ECs) are widely heterogenous depending on tissue and vascular localization. Jambusaria et al. recently demonstrated that ECs in various tissues surprisingly possess mRNA signatures of their underlying parenchyma. The mechanism underlying this observation remains unexplained, and could include mRNA contamination during cell isolation, in vivo mRNA paracrine transfer from parenchymal cells to ECs, or cell-autonomous expression of these mRNAs in ECs. Here, we use a combination of bulk RNASeq, single-cell RNASeq datasets, in situ mRNA hybridization, and most importantly ATAC-Seq of FACS-isolated nuclei, to show that cardiac ECs actively express cardiomyocyte myofibril (CMF) genes and have open chromatin at CMF gene promoters. These open chromatin sites are enriched for sites targeted by cardiac transcription factors, and closed upon expansion of ECs in culture. Together, these data demonstrate unambiguously that the expression of CMF genes in ECs is cell-autonomous, and not simply a result of technical contamination or paracrine transfers of mRNAs, and indicate that local cues in the heart in vivo unexpectedly maintain fully open chromatin in ECs at genes previously thought limited to cardiomyocytes.

Indexed as

TranscriptomeAnimalsChromatinEndothelial CellsHeartMiceMyocytes, CardiacMyofibrilsChromatincardiologycell biologycell identitychromosomesendothelial cellsepigeneticsgene expressionmousevascular biology

Identifiers

PMID33315013
PMCPMC7758065
OpenAlexW3110687636

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.