Evidence map›Paper›PMID 33314183›Full record

Trial reportAlimentary pharmacology & therapeutics2021

Fructan-sensitive children with irritable bowel syndrome have distinct gut microbiome signatures.

Bruno P Chumpitazi, Kristi L Hoffman, Daniel P Smith, Ann R McMeans, Salma Musaad, James Versalovic, Joseph F Petrosino, Robert J Shulman

Open access · greenAbstract readRandomized Controlled Trial
In one paragraph

Trial report in Alimentary pharmacology & therapeutics, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 23 citations in OpenAlex.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 2 countries.

Bruno P ChumpitaziDepartment of Pediatrics, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0002-0829-0036
Kristi L HoffmanDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.
Daniel P SmithDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0002-2479-2044
Ann R McMeansDepartment of Pediatrics, Baylor College of Medicine, Houston, TX, USA.
Salma MusaadChildren's Nutrition Research Center, United States Department of Agriculture, Houston, TX, USA.
James VersalovicDepartment of Pathology and Immunology, Baylor College of Medicine, Houston, TX, USA.
Joseph F PetrosinoDepartment of Molecular Virology and Microbiology, Baylor College of Medicine, Houston, TX, USA.
Robert J ShulmanDepartment of Pediatrics, Baylor College of Medicine, Houston, TX, USA.ORCID 0000-0003-2385-0991
Baylor College of Medicine · USUnited States Department of Agriculture · US

Funding

Tissue Analysis & Molecular Imaging CoreP30DK056338 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI Geoffrey A Preidis · 2001 to 2026
$28.3M
Translational Research Support CoreP30ES030285 · NIEHS · BAYLOR COLLEGE OF MEDICINE · PI Casey W Wright · 2019 to 2026
$14.7M
The Human Microbiome in Pediatric Abdominal Pain and Intestinal InflammationUH3DK083990 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI VERSALOVIC, JAMES · 2010 to 2012
$3.3M
Intestinal Microbiome Fructan Metabolism and Symptom Generation in Childhood IBSK23DK101688 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI CHUMPITAZI, BRUNO PEDRO · 2014 to 2018
$879k
Nonbacterial Gut Microbiome and Fructan Symptom Generation in Childhood IBSR03DK117219 · NIDDK · BAYLOR COLLEGE OF MEDICINE · PI CHUMPITAZI, BRUNO PEDRO · 2018 to 2019
$238k
NIDDK NIH HHS K23 DK101688NIDDK NIH HHS P30 DK056338NIDDK NIH HHS R03 DK117219NIDDK NIH HHS UH3 DK083990NIEHS NIH HHS P30 ES030285United States Department of Agriculture/Agriculture Research Service 6250-51000-043
6 · The paper itself

Abstract

backgroundDietary fructans may worsen gastrointestinal symptoms in children with irritable bowel syndrome (IBS).

aimTo determine whether gut microbiome composition and function are associated with childhood IBS fructan-induced symptoms.

methodsFaecal samples were collected from 38 children aged 7-17 years with paediatric Rome III IBS, who previously completied a double-blind, randomised, placebo-controlled crossover (fructan vs maltodextrin) trial. Fructan sensitivity was defined as an increase of ≥30% in abdominal pain frequency during the fructan diet. Gut microbial composition was determined via 16Sv4 rDNA sequencing. LEfSe evaluated taxonomic composition differences. Tax4Fun2 predicted microbial fructan metabolic pathways.

resultsAt baseline, 17 fructan-sensitive (vs 21 fructan-tolerant) subjects had lower alpha diversity (q < 0.05) and were enriched in the genus Holdermania. In contrast, fructan-tolerant subjects were enriched in 14 genera from the class Clostridia. During the fructan diet, fructan-sensitive (vs tolerant) subjects were enriched in both Agathobacter (P = 0.02) and Cyanobacteria (P = 0.0001). In contrast, fructan-tolerant subjects were enriched in three genera from the Clostridia class. Comparing the fructan vs maltodextrin diet, fructan-sensitive subjects had a significantly increased relative abundance of Bifidobacterium (P = 0.02) while fructan-tolerant subjects had increased Anaerostipes (P = 0.03) during the fructan diet. Only fructan-sensitive subjects had a trend towards increased predicted β-fructofuranosidase during the fructan vs maltodextrin diet.

conclusionsFructan-sensitive children with IBS have distinct gut microbiome signatures. These microbiome signatures differ both at baseline and in response to a fructan challenge.

Indexed as

Gastrointestinal MicrobiomeIrritable Bowel SyndromeAdolescentBifidobacteriumChildFecesFructansHumansFructans

Identifiers

PMID33314183
PMCPMC8281336
OpenAlexW3112071915

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.