Evidence map›Paper›PMID 33310702›Full record

ArticleThe Journal of biological chemistry

Fc γ receptor IIIa/CD16a processing correlates with the expression of glycan-related genes in human natural killer cells.

Kashyap R Patel, Maria C Rodriguez Benavente, W Walter Lorenz, Emily M Mace, Adam W Barb

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
0.7field-weighted citation impact, top 30% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed, 23 citations in OpenAlex.

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  17. Role ofFrontiers in immunology · 2022
    Article
  18. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Kashyap R PatelDepartment of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, Iowa, USA.
Maria C Rodriguez BenaventeDepartment of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA.
W Walter LorenzGeorgia Genomics and Bioinformatics Core and Institute of Bioinformatics, University of Georgia, Athens, Georgia, USA.
Emily M MaceDepartment of Pediatrics, Columbia University Irving Medical Center, New York, New York, USA.
Adam W BarbDepartment of Biochemistry, Biophysics and Molecular Biology, Iowa State University, Ames, Iowa, USA; Department of Biochemistry and Molecular Biology, University of Georgia, Athens, Georgia, USA; Complex Carbohydrate Research Center, University of Georgia, Athens, Georgia, USA. Electronic address: abarb@uga.edu.
University of Georgia · USColumbia University Irving Medical Center · USIowa State University · US

Funding

Mechanism and engineering of IgG-based monoclonal antibody/receptor interactionsR01GM115489 · NIGMS · UNIVERSITY OF GEORGIA · PI BARB, ADAM WESLEY · 2015 to 2019
$1.4M
Post-translational modification of cell-activating antibody receptors from primary human leukocytesR21AI142122 · NIAID · UNIVERSITY OF GEORGIA · PI BARB, ADAM WESLEY · 2019 to 2020
$415k
NIAID NIH HHS R21 AI142122NIGMS NIH HHS R01 GM115489
6 · The paper itself

Abstract

Many therapeutic monoclonal antibodies require binding to Fc γ receptors (FcγRs) for full effect and increasing the binding affinity increases efficacy. Preeminent among the five activating human FcγRs is FcγRIIIa/CD16a expressed by natural killer (NK) cells. CD16a is heavily processed, and recent reports indicate that the composition of the five CD16a asparagine(N)-linked carbohydrates (glycans) impacts affinity. These observations indicate that specific manipulation of CD16a N-glycan composition in CD16a-expressing effector cells including NK cells may improve treatment efficacy. However, it is unclear if modifying the expression of select genes that encode processing enzymes in CD16a-expressing effector cells is sufficient to affect N-glycan composition. We identified substantial processing differences using a glycoproteomics approach by comparing CD16a isolated from two NK cell lines, NK92 and YTS, with CD16a expressed by HEK293F cells and previous reports of CD16a from primary NK cells. Gene expression profiling by RNA-Seq and qRT-PCR revealed expression levels for glycan-modifying genes that correlated with CD16a glycan composition. These results identified a high degree of variability between the processing of the same human protein by different human cell types. N-glycan processing correlated with the expression of glycan-modifying genes and thus explained the substantial differences in CD16a processing by NK cells of different origins.

Indexed as

TranscriptomeCell LineGlycopeptidesHEK293 CellsHumansKiller Cells, NaturalModels, MolecularPolysaccharidesReceptors, IgGFCGR3A protein, humanGlycopeptidesPolysaccharidesReceptors, IgGFc-gamma receptorgene expressionglycoproteomicsnatural killer cells (NK cells)NK-92N-linked glycosylationYTS

Identifiers

PMID33310702
PMCPMC7948478
OpenAlexW3112435142

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.