Evidence map›Paper›PMID 33308225›Full record

ArticleBMC medical genomics2020

Identification of biological correlates associated with respiratory failure in COVID-19.

Jung Hun Oh, Allen Tannenbaum, Joseph O Deasy

Open access · goldAbstract read
In one paragraph

Article in BMC medical genomics, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
0.3field-weighted citation impact, top 28% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 13 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Potential Genes Associated with COVID-19 and Comorbidity.International journal of medical sciences · 2022
    Article
  8. Article
  9. The Impact of IFNλ4 on the Adaptive Immune Response to SARS-CoV-2 Infection.Journal of interferon & cytokine research : the official journal of the International Society for Interferon and Cytokine Research · 2021
    Article
  10. Article
  11. Article
  12. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Jung Hun OhDepartment of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA. ohj@mskcc.org.
Allen TannenbaumDepartments of Computer Science and Applied Mathematics & Statistics, Stony Brook University, Stony Brook, NY, USA.
Joseph O DeasyDepartment of Medical Physics, Memorial Sloan Kettering Cancer Center, New York, NY, USA.
Memorial Sloan Kettering Cancer Center · USApplied Mathematics (United States) · US

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI Hongbiao Carl Lekaye · 1985 to 2026
$347.4M
Radiotherapy-associated breast cancer: machine learning on genotypes to predict individualized riskR21CA234752 · NCI · SLOAN-KETTERING INST CAN RESEARCH · PI BERNSTEIN, JONINE L., OH, JUNG HUN · 2020 to 2021
$462k
NCI NIH HHS P30 CA008748NCI NIH HHS R21 CA234752
6 · The paper itself

Abstract

backgroundCoronavirus disease 2019 (COVID-19) is a global public health concern. Recently, a genome-wide association study (GWAS) was performed with participants recruited from Italy and Spain by an international consortium group.

methodsSummary GWAS statistics for 1610 patients with COVID-19 respiratory failure and 2205 controls were downloaded. In the current study, we analyzed the summary statistics with the information of loci and p-values for 8,582,968 single-nucleotide polymorphisms (SNPs), using gene ontology analysis to determine the top biological processes implicated in respiratory failure in COVID-19 patients.

resultsWe considered the top 708 SNPs, using a p-value cutoff of 5 × 10

conclusionGene ontology and PPI analyses identified cardio-pulmonary processes that may partially explain the risk of respiratory failure in COVID-19 patients.

Indexed as

Gene OntologyPolymorphism, Single NucleotideSARS-CoV-2COVID-19FemaleGenome-Wide Association StudyHumansItalyMaleRespiratory InsufficiencySpainBioinformaticsCOVID-19Genome-wide association studyRespiratory failureSARS-CoV-2Single-nucleotide polymorphisms

Identifiers

PMID33308225
PMCPMC7729705
OpenAlexW3111507650

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.