Evidence map›Paper›PMID 33308157›Full record

ArticleBMC plant biology2020

Genome-wide identification and expression analysis of the CLC gene family in pomegranate (Punica granatum) reveals its roles in salt resistance.

Cuiyu Liu, Yujie Zhao, Xueqing Zhao, Jianmei Dong, Zhaohe Yuan

Open access · goldAbstract read
In one paragraph

Article in BMC plant biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
4.2field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 29 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. The Role of Chloride Channels in Plant Responses to NaCl.International journal of molecular sciences · 2023
    Review
  7. Article
  8. Article
  9. Review
  10. Overexpression ofFrontiers in plant science · 2022
    Article
  11. Article
  12. Article
  13. Genome and Transcriptome Sequencing ofFrontiers in genetics · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Cuiyu LiuCo-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China.
Yujie ZhaoCo-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China.
Xueqing ZhaoCo-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China.
Jianmei DongCo-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China.
Zhaohe YuanCo-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, 210037, China. zhyuan88@hotmail.com.
Nanjing Forestry University · CN

Funding

Initiative Project for Talents of Nanjing Forestry University GXL2014070Initiative Project for Talents of Nanjing Forestry University GXL2018032National Natural Science Foundation of China 31901341Natural Science Foundation of Jiangsu Province BK20180768
6 · The paper itself

Abstract

backgroundsPomegranate (Punica granatum L.) is an important commercial fruit tree, with moderate tolerance to salinity. The balance of Cl

resultsIn this study, we identified seven PgCLC genes, consisting of four antiporters and three channels, based on the presence of the gating glutamate (E) and the proton glutamate (E). Phylogenetic analysis revealed that seven PgCLCs were divided into two clades, with clade I containing the typical conserved regions GxGIPE (I), GKxGPxxH (II) and PxxGxLF (III), whereas clade II not. Multiple sequence alignment revealed that PgCLC-B had a P [proline, Pro] residue in region I, which was suspected to be a NO

conclusionsOur findings suggested that the PgCLC genes played important roles in balancing of Cl

Indexed as

Multigene FamilyAmino Acid SequenceChloride ChannelsGene Expression ProfilingGenome, PlantPhylogenyPlant ProteinsPomegranateSalt ToleranceSalt-Tolerant PlantsSequence AlignmentChloride ChannelsPlant ProteinsAnion contentCLC gene familyExpression patternNaCl stressPhylogenetic analysis

Identifiers

PMID33308157
PMCPMC7733266
OpenAlexW3112726291

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.