Evidence map›Paper›PMID 33304466›Full record

ReviewComputational and structural biotechnology journal2020

Structure and function of the vacuolar Ccc1/VIT1 family of iron transporters and its regulation in fungi.

Raquel Sorribes-Dauden, David Peris, María Teresa Martínez-Pastor, Sergi Puig

Open access · goldAbstract readReview
In one paragraph

Review in Computational and structural biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
5.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 40 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Article
  14. Expression and mutagenesis studies in theFrontiers in plant science · 2023
    Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 1 country.

Raquel Sorribes-DaudenDepartamento de Bioquímica y Biología Molecular, Universitat de València, Burjassot, Valencia, Spain.
David PerisDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Paterna, Valencia, Spain.
María Teresa Martínez-PastorDepartamento de Bioquímica y Biología Molecular, Universitat de València, Burjassot, Valencia, Spain.
Sergi PuigDepartamento de Biotecnología, Instituto de Agroquímica y Tecnología de Alimentos (IATA), Consejo Superior de Investigaciones Científicas (CSIC), Paterna, Valencia, Spain.
Consejo Superior de Investigaciones Científicas · ESUniversitat de València · ES

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Iron is an essential micronutrient for most living beings since it participates as a redox active cofactor in many biological processes including cellular respiration, lipid biosynthesis, DNA replication and repair, and ribosome biogenesis and recycling. However, when present in excess, iron can participate in Fenton reactions and generate reactive oxygen species that damage cells at the level of proteins, lipids and nucleic acids. Organisms have developed different molecular strategies to protect themselves against the harmful effects of high concentrations of iron. In the case of fungi and plants, detoxification mainly occurs by importing cytosolic iron into the vacuole through the Ccc1/VIT1 iron transporter. New sequenced genomes and bioinformatic tools are facilitating the functional characterization, evolution and ecological relevance of metabolic pathways and homeostatic networks across the Tree of Life. Sequence analysis shows that Ccc1/VIT1 homologs are widely distributed among organisms with the exception of animals. The recent elucidation of the crystal structure of a Ccc1/VIT1 plant ortholog has enabled the identification of both conserved and species-specific motifs required for its metal transport mechanism. Moreover, recent studies in the yeast

Indexed as

BLOSUM, BLOcks SUbstitution MatrixbZIP, basic leucine-zipperCBC, CCAAT-binding core complexCcc1Cg, Candida glabrataCRD, Cysteine-rich domainCS, Consistency scoreEg, Eucalyptus grandisFe, IronFungiHap, Heme activator proteinH, HelixIron detoxificationIron regulationIron transportISC, Iron-sulfur lusterMAFFT, Multiple Alignment using Fast Fourier TransformMBD, Metal-binding domainML, Maximum-likelihoodNRAMP, Natural Resistance-Associated Macrophage ProteinPlantsROS, Reactive oxygen speciesTMD, Transmembrane domainVacuoleVIT1VIT, Vacuolar iron transporterVTL, Vacuolar iron transporter-likeYeastYRE, Yap response elements

Identifiers

PMID33304466
PMCPMC7714665
OpenAlexW3109092208

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.