Evidence map›Paper›PMID 33304465›Full record

ArticleComputational and structural biotechnology journal2020

HARP: a database of structural impacts of systematic missense mutations in drug targets of

Sundeep Chaitanya Vedithi, Sony Malhotra, Marcin J Skwark, Asma Munir, Marta Acebrón-García-De-Eulate, Vaishali P Waman, Ali Alsulami, David B Ascher, Tom L Blundell

Open access · goldAbstract read
In one paragraph

Article in Computational and structural biotechnology journal, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
0.4field-weighted citation impact, top 24% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it, 22 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Unlocking Opportunities forACS infectious diseases · 2024
    Review
  5. Article
  6. AI-Driven Enhancements in Drug Screening and Optimization.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  7. Article
  8. Using Graph-Based Signatures to Guide Rational Antibody Engineering.Methods in molecular biology (Clifton, N.J.) · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Distinguishing between PTEN clinical phenotypes through mutation analysis.Computational and structural biotechnology journal · 2021
    Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Sundeep Chaitanya VedithiDepartment of Biochemistry, University of Cambridge, Tennis Court Rd., CB2 1GA, UK.
Sony MalhotraDepartment of Biological Sciences, Institute of Structural and Molecular Biology, Birkbeck College, University of London, Bloomsbury, London WC1E 7HX, United Kingdom.
Marcin J SkwarkDepartment of Biochemistry, University of Cambridge, Tennis Court Rd., CB2 1GA, UK.
Asma MunirDepartment of Biochemistry, University of Cambridge, Tennis Court Rd., CB2 1GA, UK.
Marta Acebrón-García-De-EulateDepartment of Biochemistry, University of Cambridge, Tennis Court Rd., CB2 1GA, UK.
Vaishali P WamanUniversity College London, Institute of Structural and Molecular Biology, Bloomsbury, London, WC1E 6BT, United Kingdom.
Ali AlsulamiDepartment of Biochemistry, University of Cambridge, Tennis Court Rd., CB2 1GA, UK.
David B AscherDepartment of Biochemistry, University of Cambridge, Tennis Court Rd., CB2 1GA, UK.
Tom L BlundellDepartment of Biochemistry, University of Cambridge, Tennis Court Rd., CB2 1GA, UK.
University of Cambridge · GBInstitute of Structural and Molecular Biology · GBBaker Heart and Diabetes Institute · AU

Funding

Wellcome Trust
6 · The paper itself

Abstract

Computational Saturation Mutagenesis is an

Indexed as

Computational saturation mutagenesisDrug resistanceInteratomic interactionsMutationsMycobacterium lepraeProtein stability

Identifiers

PMID33304465
PMCPMC7711215
OpenAlexW3109430993

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.