Evidence map›Paper›PMID 33301936›Full record

ArticleNeuroImage2021

Robust brain network identification from multi-subject asynchronous fMRI data.

Jian Li, Jessica L Wisnowski, Anand A Joshi, Richard M Leahy

Abstract read
In one paragraph

Article in NeuroImage, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Jian LiSignal and Image Processing Institute, University of Southern California, Los Angeles, CA 90089, United States. Electronic address: jian.li.andrew@gmail.com.
Jessica L WisnowskiRadiology and Pediatrics, Division of Neonatology, Children's Hospital Los Angeles, Los Angeles, CA 90027, United States; Keck School of Medicine, University of Southern California, Los Angeles, CA 90089, United States.
Anand A JoshiSignal and Image Processing Institute, University of Southern California, Los Angeles, CA 90089, United States.
Richard M LeahySignal and Image Processing Institute, University of Southern California, Los Angeles, CA 90089, United States.

Funding

BrainStorm: Highly Extensible Software for Advanced Electrophysiology and MEG/EEG ImagingR01EB026299 · NIBIB · UNIVERSITY OF SOUTHERN CALIFORNIA · PI LEAHY, RICHARD M · 2018 to 2025
$5.4M
Tools for Large-Scale Platform-Independent MEG Data AnalysisR01EB009048 · NIBIB · MASSACHUSETTS GENERAL HOSPITAL · PI HAMALAINEN, MATTI, LEAHY, RICHARD M · 2009 to 2016
$4.6M
A Brain Atlas for Mapping Connectivity in Focal EpilepsyR01NS089212 · NINDS · CLEVELAND CLINIC LERNER COM-CWRU · PI LEAHY, RICHARD M, MOSHER, JOHN COMPTON · 2015 to 2019
$2.7M
Validating MRS lipids as biomarkers of brain injury in neonates with hypoxic-ischemic encephalopathyK23HD099309 · NICHD · CHILDREN'S HOSPITAL OF LOS ANGELES · PI WISNOWSKI, JESSICA L · 2019 to 2023
$693k
NIBIB NIH HHS R01 EB009048NIBIB NIH HHS R01 EB026299NICHD NIH HHS K23 HD099309NINDS NIH HHS R01 NS089212
6 · The paper itself

Abstract

We describe a novel method for robust identification of common brain networks and their corresponding temporal dynamics across subjects from asynchronous functional MRI (fMRI) using tensor decomposition. We first temporally align asynchronous fMRI data using the orthogonal BrainSync transform, allowing us to study common brain networks across sessions and subjects. We then map the synchronized fMRI data into a 3D tensor (vertices × time × subject/session). Finally, we apply Nesterov-accelerated adaptive moment estimation (Nadam) within a scalable and robust sequential Canonical Polyadic (CP) decomposition framework to identify a low rank tensor approximation to the data. As a result of CP tensor decomposition, we successfully identified twelve known brain networks with their corresponding temporal dynamics from 40 subjects using the Human Connectome Project's language task fMRI data without any prior information regarding the specific task designs. Seven of these networks show distinct subjects' responses to the language task with differing temporal dynamics; two show sub-components of the default mode network that exhibit deactivation during the tasks; the remaining three components reflect non-task-related activities. We compare results to those found using group independent component analysis (ICA) and canonical ICA. Bootstrap analysis demonstrates increased robustness of networks found using the CP tensor approach relative to ICA-based methods.

Indexed as

BrainComputer SimulationConnectomeHumansImage Processing, Computer-AssistedMagnetic Resonance ImagingModels, NeurologicalNerve NetBrain network identificationFunctional MRIOptimizationTensor decomposition

Identifiers

PMID33301936
PMCPMC7983296

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.