Evidence map›Paper›PMID 33301524›Full record

ArticlePloS one2020

Genomic analysis of the meningococcal ST-4821 complex-Western clade, potential sexual transmission and predicted antibiotic susceptibility and vaccine coverage.

Jay Lucidarme, Bingqing Zhu, Li Xu, Xilian Bai, Yuan Gao, Juan José González-López, Robert Mulhall, Kevin J Scott, Andrew Smith, Paola Stefanelli and 5 more

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.0field-weighted citation impact, top 26% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Origin ofEmerging microbes & infections · 2025
    Article
  3. Article
  4. Article
  5. Acquisition of Ciprofloxacin Resistance Among an Expanding Clade of β-Lactamase-Positive, Serogroup Y Neisseria meningitidis in the United States.Clinical infectious diseases : an official publication of the Infectious Diseases Society of America · 2021
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 8 countries.

Jay LucidarmeMeningococcal Reference Unit, Public Health England, Manchester Royal Infirmary, Manchester, United Kingdom.ORCID 0000-0001-5553-2512
Bingqing ZhuNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Li XuNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Xilian BaiMeningococcal Reference Unit, Public Health England, Manchester Royal Infirmary, Manchester, United Kingdom.
Yuan GaoNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
Juan José González-LópezDepartment of Clinical Microbiology, Hospital Universitari Vall d'Hebron, Barcelona, Spain.
Robert MulhallIrish Meningitis and Sepsis Reference Laboratory, Children's Health Ireland at Temple Street, Dublin, Ireland.
Kevin J ScottBacterial Respiratory Infection Service, Scottish Microbiology Reference Laboratory, Glasgow Royal Infirmary, Glasgow, United Kingdom.ORCID 0000-0003-3338-9967
Andrew SmithBacterial Respiratory Infection Service, Scottish Microbiology Reference Laboratory, Glasgow Royal Infirmary, Glasgow, United Kingdom.
Paola StefanelliDepartment of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy.
Bianca StenmarkDepartment of Laboratory Medicine, Faculty of Medicine and Health, Örebro University, Örebro, Sweden.ORCID 0000-0003-4637-8626
Paul TorpianoDepartment of Child and Adolescent Health, Mater Dei Hospital, Msida, Malta.
Georgina TzanakakiNational Meningitis Reference Laboratory, Dept. of Public Health Policy, School of Public Health, University of West Attica, Athens, Greece.
Ray BorrowMeningococcal Reference Unit, Public Health England, Manchester Royal Infirmary, Manchester, United Kingdom.ORCID 0000-0002-0691-6568
Zhujun ShaoNational Institute for Communicable Disease Control and Prevention, Chinese Center for Disease Control and Prevention, Beijing, PR China.
National Institute for Communicable Disease Control and Prevention · CNManchester Royal Infirmary · GBGlasgow Royal Infirmary · GBChildren's Health Ireland at Crumlin · IEIstituto Superiore di Sanità · ITMater Dei Hospital · MTÖrebro University · SEUniversity of West Attica · GRVall d'Hebron Hospital Universitari · ES

Funding

Wellcome Trust
6 · The paper itself

Abstract

introductionThe ST-4821 complex (cc4821) is a leading cause of serogroup C and serogroup B invasive meningococcal disease in China where diverse strains in two phylogenetic groups (groups 1 and 2) have acquired fluoroquinolone resistance. cc4821 was recently prevalent among carriage isolates in men who have sex with men in New York City (USA). Genome-level population studies have thus far been limited to Chinese isolates. The aim of the present study was to build upon these with an extended panel of international cc4821 isolates.

methodsGenomes of isolates from Asia (1972 to 2017), Europe (2011 to 2018), North America (2007), and South America (2014) were sequenced or obtained from the PubMLST Neisseria database. Core genome comparisons were performed in PubMLST.

resultsFour lineages were identified. Western isolates formed a distinct, mainly serogroup B sublineage with alleles associated with fluoroquinolone susceptibility (MIC <0.03 mg/L) and reduced penicillin susceptibility (MIC 0.094 to 1 mg/L). A third of these were from anogenital sites in men who have sex with men and had unique denitrification gene alleles. Generally 4CMenB vaccine strain coverage was reliant on strain-specific NHBA peptides. DISCUSSION: The previously identified cc4821 group 2 was resolved into three separate lineages. Clustering of western isolates was surprising given the overall diversity of cc4821. Possible association of this cluster with the anogenital niche is worthy of monitoring given concerns surrounding antibiotic resistance and potential subcapsular vaccine escape.

Indexed as

AdultAntigens, BacterialEuropeFemaleGenetic VariationGenomicsGenotypeHomosexuality, MaleHumansMaleMeningitis, MeningococcalMeningococcal InfectionsMeningococcal VaccinesMultilocus Sequence TypingNeisseria meningitidisNeisseria meningitidis, Serogroup B4CMenB vaccineAntigens, BacterialMeningococcal Vaccines

Identifiers

PMID33301524
PMCPMC7728179
OpenAlexW3113361328

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.