Evidence map›Paper›PMID 33301446›Full record

ArticlePLoS computational biology2020

Quantification of nematic cell polarity in three-dimensional tissues.

André Scholich, Simon Syga, Hernán Morales-Navarrete, Fabián Segovia-Miranda, Hidenori Nonaka, Kirstin Meyer, Walter de Back, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial and 2 more

Erratum issuedAbstract read
In one paragraph

Article in PLoS computational biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

12 authors.

André ScholichMax Planck Institute for the Physics of Complex Systems, Dresden, Germany.ORCID 0000-0002-9393-5459
Simon SygaMax Planck Institute for the Physics of Complex Systems, Dresden, Germany.ORCID 0000-0001-9955-9012
Hernán Morales-NavarreteMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0002-9578-2556
Fabián Segovia-MirandaMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0003-1546-0475
Hidenori NonakaMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0002-4705-7587
Kirstin MeyerMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0002-2228-2550
Walter de BackCentre for Information Services and High Performance Computing, TU Dresden, Dresden, Germany.ORCID 0000-0003-4641-8472
Lutz BruschCentre for Information Services and High Performance Computing, TU Dresden, Dresden, Germany.ORCID 0000-0003-0137-5106
Yannis KalaidzidisMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.ORCID 0000-0002-6137-1193
Marino ZerialMax Planck Institute of Molecular Cell Biology and Genetics, Dresden, Germany.
Frank JülicherMax Planck Institute for the Physics of Complex Systems, Dresden, Germany.ORCID 0000-0003-4731-9185
Benjamin M FriedrichCenter for Advancing Electronics Dresden, TU Dresden, Germany.ORCID 0000-0002-9742-6555

Funding

European Research Council 695646
6 · The paper itself

Abstract

How epithelial cells coordinate their polarity to form functional tissues is an open question in cell biology. Here, we characterize a unique type of polarity found in liver tissue, nematic cell polarity, which is different from vectorial cell polarity in simple, sheet-like epithelia. We propose a conceptual and algorithmic framework to characterize complex patterns of polarity proteins on the surface of a cell in terms of a multipole expansion. To rigorously quantify previously observed tissue-level patterns of nematic cell polarity (Morales-Navarrete et al., eLife 2019), we introduce the concept of co-orientational order parameters, which generalize the known biaxial order parameters of the theory of liquid crystals. Applying these concepts to three-dimensional reconstructions of single cells from high-resolution imaging data of mouse liver tissue, we show that the axes of nematic cell polarity of hepatocytes exhibit local coordination and are aligned with the biaxially anisotropic sinusoidal network for blood transport. Our study characterizes liver tissue as a biological example of a biaxial liquid crystal. The general methodology developed here could be applied to other tissues and in-vitro organoids.

Indexed as

Cell PolarityAnimalsCell ShapeHepatocytesLiquid CrystalsMiceModels, Theoretical

Identifiers

PMID33301446
PMCPMC7755288

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.