Evidence map›Paper›PMID 33299986›Full record

ArticleEuropean urology open science2020

Diversity in Androgen Receptor Action Among Treatment-naïve Prostate Cancers Is Reflected in Treatment Response Predictions and Molecular Subtypes.

Salma Ben-Salem, Qiang Hu, Yang Liu, Mohammed Alshalalfa, Xin Zhao, Irene Wang, Varadha Balaji Venkadakrishnan, Dhirodatta Senapati, Sangeeta Kumari, Deli Liu and 7 more

Open access · goldAbstract read
In one paragraph

Article in European urology open science, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.0field-weighted citation impact, top 20% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 11 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors at 7 institutions in 1 country.

Salma Ben-SalemDepartment of Cancer Biology, Cleveland Clinic, Cleveland, OH, USA.
Qiang HuDepartment of Biostatistics and Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.
Yang LiuDecipher Biosciences, San Diego, CA, USA.
Mohammed AlshalalfaDecipher Biosciences, San Diego, CA, USA.
Xin ZhaoDecipher Biosciences, San Diego, CA, USA.
Irene WangDepartment of Biostatistics and Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.
Varadha Balaji VenkadakrishnanDepartment of Cancer Biology, Cleveland Clinic, Cleveland, OH, USA.
Dhirodatta SenapatiDepartment of Cancer Biology, Cleveland Clinic, Cleveland, OH, USA.
Sangeeta KumariDepartment of Cancer Biology, Cleveland Clinic, Cleveland, OH, USA.
Deli LiuDepartment of Urology, Weill Cornell Medicine, New York, NY, USA.
Andrea SbonerDepartment of Pathology and Laboratory Medicine, Weill Cornell Medicine, New York, NY, USA.
Christopher E BarbieriDepartment of Urology, Weill Cornell Medicine, New York, NY, USA.
Felix FengDepartment of Radiation Oncology, University of California San Francisco, San Francisco, CA, USA.
Jean-Noel BillaudQiagen Digital Insights, Redwood City, CA, USA.
Elai DavicioniDecipher Biosciences, San Diego, CA, USA.
Song LiuDepartment of Biostatistics and Bioinformatics, Roswell Park Comprehensive Cancer Center, Buffalo, NY, USA.
Hannelore V HeemersDepartment of Cancer Biology, Cleveland Clinic, Cleveland, OH, USA.
Cleveland Clinic · USCoherus BioSciences (United States) · USCornell University · USRoswell Park Comprehensive Cancer Center · USUniversity of California, San Francisco · USCleveland State University · USDigital Science (United States) · US

Funding

Weill Cornell Medicine (WCM) SPORE in Prostate CancerP50CA211024 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI LODA, MASSIMO · 2017 to 2021
$10.9M
Immuno-Oncology Translation Network: Data Management and Resource-Sharing Center at RPCIU24CA232979 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI HUTSON, ALAN DAVID, LIU, SONG · 2018 to 2024
$8.9M
YAP1 and RB1 cooperate to regulate lung cancer lineage plasticity and therapeutic resistanceU24CA274159 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI DAVID W. GOODRICH, Alan David Hutson · 2022 to 2026
$8.5M
Towards selective androgen deprivation by targeting androgen activation of SRFR01CA166440 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI HEEMERS, HANNELORE · 2014 to 2024
$3.4M
Collaborative genomic alterations and transcriptional control in prostate cancerR01CA233650 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI BARBIERI, CHRISTOPHER E · 2019 to 2023
$2.8M
Coordinate Regulation of Oncogenic Signaling Pathways in SPOP Mutant Prostate CancerR37CA215040 · NCI · WEILL MEDICAL COLL OF CORNELL UNIV · PI BARBIERI, CHRISTOPHER E · 2018 to 2024
$2.6M
NCI NIH HHS P50 CA211024NCI NIH HHS R01 CA166440NCI NIH HHS R01 CA233650NCI NIH HHS R37 CA215040NCI NIH HHS U24 CA232979NCI NIH HHS U24 CA274159
6 · The paper itself

Abstract

backgroundMetastatic prostate cancer (CaP) treatments are evolving rapidly but without evidence-based biomarkers to predict responses, and to maximize remissions and survival.

objectiveTo determine the activity of androgen receptor (AR), the target for default first-line systemic treatment, in localized treatment-naïve CaP and its association with clinical risk factors, molecular markers, CaP subtypes, and predictors of treatment response. DESIGN SETTING AND

participantsWe examined 452 bona fide AR target genes in clinical-grade expression profiles from 6532 such CaPs collected between 2013 and 2017 by US physicians ordering the Decipher RP test. Results were validated in three independent smaller cohorts ( OUTCOME MEASUREMENTS AND STATISTICAL ANALYSIS: Unsupervised clustering of CaPs based on AR target gene expression was aligned with clinical variables, differentiation scores, molecular subtypes, and predictors of response to hormonal therapy, radiotherapy, and chemotherapy. AR target gene sets were analyzed via Gene Set Enrichment Analysis for differentiation and treatment resistance, Ingenuity Pathway Analysis for associated biology, and Cistrome for genomic AR binding site (ARBS) composition. RESULTS AND LIMITATIONS: Expression of eight AR target gene subsignatures gave rise to five CaP clusters, which were preferentially associated with CaP molecular subtypes, differentiation, and predictors of treatment response rather than with clinical variables. Subsignatures differed in contribution to CaP progression, luminal/basal differentiation, CaP biology, and ARBS composition. Validation in prospective trials and optimized quantitation are needed for clinical implementation.

conclusionsMeasurement of AR activity patterns in treatment-naïve CaP may serve as a first branch of an evidence-based decision tree to optimize personalized treatment plans. PATIENT SUMMARY: Treatment options for metastatic prostate cancer are increasing without information needed to choose the right treatment for the right patient. We found variation in the behavior of the target for the default first-line therapy before treatment, which may help optimize treatment plans.

Indexed as

BiomarkerCastrationChemotherapyDisease stratificationHormonal therapyRadiotherapyTreatment response

Identifiers

PMID33299986
PMCPMC7723342
OpenAlexW3094935795

What OpenQuestion holds

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.