Evidence map›Paper›PMID 33298436›Full record

ArticleScience advances2020

Noninvasive characterization of Alzheimer's disease by circulating, cell-free messenger RNA next-generation sequencing.

Shusuke Toden, Jiali Zhuang, Alexander D Acosta, Amy P Karns, Neeraj S Salathia, James B Brewer, Donna M Wilcock, Jonathan Aballi, Mike Nerenberg, Stephen R Quake and 1 more

Open access · goldAbstract read
In one paragraph

Article in Science advances, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
3.3field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 75 citations in OpenAlex.

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  20. Plasma cell-free RNA signatures of inflammatory syndromes in children.Proceedings of the National Academy of Sciences of the United States of America · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Shusuke TodenMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA. stoden@molecularstethoscope.com aibarra@molecularstethoscope.com.ORCID 0000-0002-3270-3611
Jiali ZhuangMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA.ORCID 0000-0001-6116-5130
Alexander D AcostaMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA.ORCID 0000-0002-9391-9870
Amy P KarnsMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA.
Neeraj S SalathiaMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA.ORCID 0000-0002-1235-2439
James B BrewerDepartment of Neurosciences, University of California, San Diego, La Jolla, CA 92093, USA.
Donna M WilcockDepartment of Physiology, Sanders-Brown Center on Aging, 800 S. Limestone Street, Lexington, KY 40536, USA.ORCID 0000-0003-3388-1564
Jonathan AballiMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA.ORCID 0000-0002-2162-0773
Mike NerenbergMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA.
Stephen R QuakeDepartments of Bioengineering and Applied Physics, Stanford University, Stanford, CA 94305, USA.ORCID 0000-0002-1613-0809
Arkaitz IbarraMolecular Stethoscope Inc., 3210 Merryfield Row, San Diego, CA 92121, USA. stoden@molecularstethoscope.com aibarra@molecularstethoscope.com.ORCID 0000-0003-3439-6579
Scope Group (United States) · USChan Zuckerberg Initiative (United States) · USUniversity of California San Diego · USUniversity of Kentucky · US

Funding

National Centralized Repository for Alzheimer's Disease and Related Dementias (NCRAD)U24AG021886 · NIA · INDIANA UNIV-PURDUE UNIV AT INDIANAPOLIS · PI TATIANA M. FOROUD · 2002 to 2026
$119.8M
Smartphone-Based "Burst" Cognitive AssessmentsP01AG003991 · NIA · WASHINGTON UNIVERSITY · PI Tammie Lee Smith Benzinger · 1985 to 2026
$69.5M
WASHINGTON UNIVERSITY ALZHEIMERS DISEASE RESEARCH CENTERP50AG005681 · NIA · WASHINGTON UNIVERSITY · PI MORRIS, JOHN · 1985 to 2019
$52.1M
The natural history of AB accumulation in preclinical ADP01AG026276 · NIA · WASHINGTON UNIVERSITY · PI SCHINDLER, SUZANNE ELIZABETH · 2005 to 2025
$49.5M
GINKGO BILOBA PREVENTION TRIAL IN OLDER INDIVIDUALSU01AT000162 · NCCIH · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LOPEZ, OSCAR L. · 1999 to 2009
$34.7M
University of Kentucky Alzheimer's Disease Core Center - Biomarker CoreP30AG028383 · NIA · UNIVERSITY OF KENTUCKY · PI SCHMITT, FREDERICK · 2006 to 2020
$23.3M
NCCIH NIH HHS U01 AT000162NIA NIH HHS P01 AG003991NIA NIH HHS P01 AG026276NIA NIH HHS P01 AG03991NIA NIH HHS P30 AG028383NIA NIH HHS P50 AG005681NIA NIH HHS P50 AG05681NIA NIH HHS U24 AG021886
6 · The paper itself

Abstract

The lack of accessible noninvasive tools to examine the molecular alterations occurring in the brain limits our understanding of the causes and progression of Alzheimer's disease (AD), as well as the identification of effective therapeutic strategies. Here, we conducted a comprehensive profiling of circulating, cell-free messenger RNA (cf-mRNA) in plasma of 126 patients with AD and 116 healthy controls of similar age. We identified 2591 dysregulated genes in the cf-mRNA of patients with AD, which are enriched in biological processes well known to be associated with AD. Dysregulated genes included brain-specific genes and resembled those identified to be dysregulated in postmortem AD brain tissue. Furthermore, we identified disease-relevant circulating gene transcripts that correlated with the severity of cognitive impairment. These data highlight the potential of high-throughput cf-mRNA sequencing to evaluate AD-related pathophysiological alterations in the brain, leading to precision healthcare solutions that could improve AD patient management.

Indexed as

Alzheimer DiseaseCell-Free Nucleic AcidsBrainGene Expression ProfilingHigh-Throughput Nucleotide SequencingHumansRNA, MessengerCell-Free Nucleic AcidsRNA, Messenger

Identifiers

PMID33298436
PMCPMC7821903
OpenAlexW3112708956

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.