Evidence map›Paper›PMID 33297953›Full record

ArticleBMC evolutionary biology2020

The evolution of the huntingtin-associated protein 40 (HAP40) in conjunction with huntingtin.

Manuel Seefelder, Vikram Alva, Bin Huang, Tatjana Engler, Wolfgang Baumeister, Qiang Guo, Rubén Fernández-Busnadiego, Andrei N Lupas, Stefan Kochanek

Open access · goldAbstract read
In one paragraph

Article in BMC evolutionary biology, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed, 1 pooled it
1.2field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 1 synthesis or guideline pooled it, 18 citations in OpenAlex.

  1. Pooled it
  2. Structural-functional analyses of the huntingtin/HAP40 complex inJournal of biomolecular structure & dynamics · 2026
    Article
  3. Review
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  6. Diversity and structural-functional insights of alpha-solenoid proteins.Protein science : a publication of the Protein Society · 2024
    Review
  7. Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 4 institutions in 2 countries.

Manuel SeefelderDepartment of Gene Therapy, Ulm University, 89081, Ulm, Germany.
Vikram AlvaDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Max-Planck-Ring 5, 72076, Tübingen, Germany.
Bin HuangDepartment of Gene Therapy, Ulm University, 89081, Ulm, Germany.
Tatjana EnglerDepartment of Gene Therapy, Ulm University, 89081, Ulm, Germany.
Wolfgang BaumeisterDepartment of Molecular Structural Biology, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany.
Qiang GuoDepartment of Molecular Structural Biology, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany.
Rubén Fernández-BusnadiegoDepartment of Molecular Structural Biology, Max Planck Institute of Biochemistry, 82152, Martinsried, Germany.
Andrei N LupasDepartment of Protein Evolution, Max Planck Institute for Developmental Biology, Max-Planck-Ring 5, 72076, Tübingen, Germany. andrei.lupas@tuebingen.mpg.de.
Stefan KochanekDepartment of Gene Therapy, Ulm University, 89081, Ulm, Germany. stefan.kochanek@uni-ulm.de.ORCID 0000-0001-7494-1602
Universität Ulm · DEMax Planck Institute for Developmental Biology · DEMax Planck Institute of Biochemistry · DEUniversitätsmedizin Göttingen · DE

Funding

Deutsche Forschungsgemeinschaft 412854449Deutsche Forschungsgemeinschaft EXC 2067/1- 390729940European Commission () FP7 GA ERC-2012-SyG_318987-ToPAG
6 · The paper itself

Abstract

backgroundThe huntingtin-associated protein 40 (HAP40) abundantly interacts with huntingtin (HTT), the protein that is altered in Huntington's disease (HD). Therefore, we analysed the evolution of HAP40 and its interaction with HTT.

resultsWe found that in amniotes HAP40 is encoded by a single-exon gene, whereas in all other organisms it is expressed from multi-exon genes. HAP40 co-occurs with HTT in unikonts, including filastereans such as Capsaspora owczarzaki and the amoebozoan Dictyostelium discoideum, but both proteins are absent from fungi. Outside unikonts, a few species, such as the free-living amoeboflagellate Naegleria gruberi, contain putative HTT and HAP40 orthologs. Biochemically we show that the interaction between HTT and HAP40 extends to fish, and bioinformatic analyses provide evidence for evolutionary conservation of this interaction. The closest homologue of HAP40 in current protein databases is the family of soluble N-ethylmaleimide-sensitive factor attachment proteins (SNAPs).

conclusionOur results indicate that the transition from a multi-exon to a single-exon gene appears to have taken place by retroposition during the divergence of amphibians and amniotes, followed by the loss of the parental multi-exon gene. Furthermore, it appears that the two proteins probably originated at the root of eukaryotes. Conservation of the interaction between HAP40 and HTT and their likely coevolution strongly indicate functional importance of this interaction.

Indexed as

DictyosteliumEukaryotaHuntingtin ProteinHuntington DiseaseNuclear ProteinsAnimalsEvolution, MolecularHAP40 protein, humanHuntingtin ProteinNuclear ProteinsHuntingtinHuntingtin-associated protein 40Molecular evolutionProtein coevolutionRetropositionSingle-exon geneSoluble N-ethylmaleimide-sensitive factor attachment proteins

Identifiers

PMID33297953
PMCPMC7725122
OpenAlexW3111705729

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.