Evidence map›Paper›PMID 33296676›Full record

ArticleMolecular cell2021

Pre-termination Transcription Complex: Structure and Function.

Zhitai Hao, Vitaly Epshtein, Kelly H Kim, Sergey Proshkin, Vladimir Svetlov, Venu Kamarthapu, Binod Bharati, Alexander Mironov, Thomas Walz, Evgeny Nudler

Open access · bronzeAbstract read
In one paragraph

Article in Molecular cell, 2021. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 67 papers.

0numbers the graph read from it
0cells of the map it votes in
67citing papers in PubMed
4.8field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

67 citing papers in PubMed, 95 citations in OpenAlex.

  1. Article
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  6. Structural principles of transcriptional collisions.bioRxiv : the preprint server for biology · 2026
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  19. Biochemical characterization ofJournal of bacteriology · 2024
    Article
  20. Article

7 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Zhitai HaoDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA.
Vitaly EpshteinDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA.
Kelly H KimLaboratory of Molecular Electron Microscopy, The Rockefeller University, New York, NY 10065, USA.
Sergey ProshkinEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Moscow 119991, Russia.
Vladimir SvetlovDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA.
Venu KamarthapuDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA; Howard Hughes Medical Institute, New York University School of Medicine, New York, NY 10016, USA.
Binod BharatiDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA; Howard Hughes Medical Institute, New York University School of Medicine, New York, NY 10016, USA.
Alexander MironovEngelhardt Institute of Molecular Biology, Russian Academy of Sciences, Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Moscow 119991, Russia.
Thomas WalzLaboratory of Molecular Electron Microscopy, The Rockefeller University, New York, NY 10065, USA.
Evgeny NudlerDepartment of Biochemistry and Molecular Pharmacology, New York University School of Medicine, New York, NY 10016, USA; Howard Hughes Medical Institute, New York University School of Medicine, New York, NY 10016, USA. Electronic address: evgeny.nudler@nyulangone.org.
Howard Hughes Medical Institute · USNew York University · USEngelhardt Institute of Molecular Biology · RURockefeller University · US

Funding

Transcription termination and gene regulation by Rho: Integrative analysisR01GM126891 · NIGMS · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI NUDLER, EVGENY A · 2018 to 2021
$2.3M
Howard Hughes Medical InstituteNIGMS NIH HHS R01 GM126891
6 · The paper itself

Abstract

Rho is a general transcription termination factor playing essential roles in RNA polymerase (RNAP) recycling, gene regulation, and genomic stability in most bacteria. Traditional models of transcription termination postulate that hexameric Rho loads onto RNA prior to contacting RNAP and then translocates along the transcript in pursuit of the moving RNAP to pull RNA from it. Here, we report the cryoelectron microscopy (cryo-EM) structures of two termination process intermediates. Prior to interacting with RNA, Rho forms a specific "pre-termination complex" (PTC) with RNAP and elongation factors NusA and NusG, which stabilize the PTC. RNA exiting RNAP interacts with NusA before entering the central channel of Rho from the distal C-terminal side of the ring. We map the principal interactions in the PTC and demonstrate their critical role in termination. Our results support a mechanism in which the formation of a persistent PTC is a prerequisite for termination.

Indexed as

Gene Expression Regulation, BacterialTranscription Termination, GeneticAmino Acid SequenceBinding SitesCloning, MolecularCryoelectron MicroscopyDNA, BacterialDNA-Directed RNA PolymerasesEscherichia coliEscherichia coli ProteinsGenetic VectorsModels, MolecularPeptide Elongation FactorsProtein BindingProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandDNA, BacterialDNA-Directed RNA PolymerasesEscherichia coli ProteinsnusA protein, E coliNusG protein, E coliPeptide Elongation FactorsProtein SubunitsRho protein, E coliRNA, BacterialTranscriptional Elongation FactorsTranscription FactorsRNA polymerase, transcription termination, Rho, NusA, NusG, elongation complex, Cryo-EM

Identifiers

PMID33296676
PMCPMC7904319
OpenAlexW3111408663

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.