Evidence map›Paper›PMID 33293519›Full record

ArticleNature communications2020

The bacterial multidrug resistance regulator BmrR distorts promoter DNA to activate transcription.

Chengli Fang, Linyu Li, Yihan Zhao, Xiaoxian Wu, Steven J Philips, Linlin You, Mingkang Zhong, Xiaojin Shi, Thomas V O'Halloran, Qunyi Li and 1 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Article
  3. Review
  4. A finely balanced order-disorder equilibrium sculpts the folding-binding landscape of an antibiotic sequestering protein.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  5. Determinants ofGenes · 2024
    Article
  6. Article
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  8. Article
  9. Structural Analysis ofMicroorganisms · 2023
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 2 countries.

Chengli FangKey Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, 200032, Shanghai, China.ORCID 0000-0002-8483-7902
Linyu LiClinical Pharmacy Laboratory, Huashan Hospital, Fudan University, 200040, Shanghai, China.
Yihan ZhaoKey Laboratory of Plant Stress Biology, State Key Laboratory of Cotton Biology, School of Life Sciences, Henan University, 475004, Kaifeng, China.
Xiaoxian WuKey Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, 200032, Shanghai, China.
Steven J PhilipsDepartment of Chemistry, Northwestern University, Evanston, IL, 60208, USA.
Linlin YouKey Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, 200032, Shanghai, China.
Mingkang ZhongClinical Pharmacy Laboratory, Huashan Hospital, Fudan University, 200040, Shanghai, China.
Xiaojin ShiClinical Pharmacy Laboratory, Huashan Hospital, Fudan University, 200040, Shanghai, China.
Thomas V O'HalloranDepartment of Chemistry, Northwestern University, Evanston, IL, 60208, USA.ORCID 0000-0001-8732-5059
Qunyi LiClinical Pharmacy Laboratory, Huashan Hospital, Fudan University, 200040, Shanghai, China. liqunyi@huashan.org.cn.
Yu ZhangKey Laboratory of Synthetic Biology, CAS Center for Excellence in Molecular Plant Sciences, Chinese Academy of Sciences, 200032, Shanghai, China. yzhang@sippe.ac.cn.ORCID 0000-0002-1778-8389
Chinese Academy of Sciences · CNFudan University · CNNorthwestern University · USHenan University · CN

Funding

Spatio-Temporal Organization of Chromatin and Information Transfer in CancerU54CA193419 · NCI · NORTHWESTERN UNIVERSITY AT CHICAGO · PI O'HALLORAN, THOMAS V · 2015 to 2020
$10.4M
METALLOREGULATION BY MERR AND FUR PROTEIN FAMILIESR37GM038784 · NIGMS · NORTHWESTERN UNIVERSITY · PI O'HALLORAN, THOMAS V · 2001 to 2010
$3.6M
Metalloregulation by MerR and Fur Protein FamiliesR01GM038784 · NIGMS · NORTHWESTERN UNIVERSITY · PI O'HALLORAN, THOMAS V · 1992 to 2025
$3.5M
NCI NIH HHS U54 CA193419NIGMS NIH HHS R01 GM038784NIGMS NIH HHS R37 GM038784
6 · The paper itself

Abstract

The MerR-family proteins represent a unique family of bacteria transcription factors (TFs), which activate transcription in a manner distinct from canonical ones. Here, we report a cryo-EM structure of a B. subtilis transcription activation complex comprising B. subtilis six-subunit (2αββ'ωε) RNA Polymerase (RNAP) core enzyme, σ

Indexed as

Gene Expression Regulation, BacterialTranscriptional ActivationBacillus subtilisBacterial ProteinsCryoelectron MicroscopyDNA-Directed RNA PolymerasesDrug Resistance, Multiple, BacterialPromoter Regions, GeneticTrans-ActivatorsBacterial ProteinsBmrR protein, bacteriaDNA-Directed RNA PolymerasesTrans-Activators

Identifiers

PMID33293519
PMCPMC7722741
OpenAlexW3110729646

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.