Evidence map›Paper›PMID 33291330›Full record

ArticleViruses2020

Increased HIV Subtype Diversity Reflecting Demographic Changes in the HIV Epidemic in New South Wales, Australia.

Francesca Di Giallonardo, Angie N Pinto, Phillip Keen, Ansari Shaik, Alex Carrera, Hanan Salem, Christine Selvey, Steven J Nigro, Neil Fraser, Karen Price and 7 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Viruses, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Francesca Di GiallonardoThe Kirby Institute, The University of New South Wales, Sydney 2052, Australia.
Angie N PintoThe Kirby Institute, The University of New South Wales, Sydney 2052, Australia.
Phillip KeenThe Kirby Institute, The University of New South Wales, Sydney 2052, Australia.ORCID 0000-0002-2678-0645
Ansari ShaikThe Kirby Institute, The University of New South Wales, Sydney 2052, Australia.
Alex CarreraHIV Reference Laboratory, Sydney 2010, Australia.
Hanan SalemNew South Wales Health Pathology-RPA, Royal Prince Alfred Hospital, Camperdown 2050, Australia.
Christine SelveyHealth Protection NSW, Sydney 2059, Australia.
Steven J NigroHealth Protection NSW, Sydney 2059, Australia.
Neil FraserPositive Life New South Wales, Sydney 2010, Australia.
Karen PriceAIDS Council of NSW (ACON), Sydney 2010, Australia.
Joanne HoldenNSW Ministry of Health, Sydney 2059, Australia.
Frederick J LeeNew South Wales Health Pathology-RPA, Royal Prince Alfred Hospital, Camperdown 2050, Australia.
Dominic E DwyerNew South Wales Health Pathology-ICPMR, Westmead Hospital, Westmead 2145, Australia.
Benjamin R BavintonThe Kirby Institute, The University of New South Wales, Sydney 2052, Australia.ORCID 0000-0001-5834-8278
Andrew E GrulichThe Kirby Institute, The University of New South Wales, Sydney 2052, Australia.
Anthony D KelleherThe Kirby Institute, The University of New South Wales, Sydney 2052, Australia.
On Behalf Of The Nsw Hiv Prevention Partnership Project

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Changes over time in HIV-1 subtype diversity within a population reflect changes in factors influencing the development of local epidemics. Here we report on the genetic diversity of 2364 reverse transcriptase sequences from people living with HIV-1 in New South Wales (NSW) notified between 2004 and 2018. These data represent >70% of all new HIV-1 notifications in the state over this period. Phylogenetic analysis was performed to identify subtype-specific transmission clusters. Subtype B and non-B infections differed across all demographics analysed (

Indexed as

Genetic VariationGenotypeAdolescentAdultChildChild, PreschoolComputational BiologyFemaleHIV-1HIV InfectionsHIV SeropositivityHomosexuality, MaleHumansInfantInfant, NewbornMaleheterosexual transmissionHIVnon-B subtypesstage of infectiontransmission clusters

Identifiers

PMID33291330
PMCPMC7762219

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.