Evidence map›Paper›PMID 33289551›Full record

ArticleJournal of medicinal chemistry2020

Assessment of NR4A Ligands That Directly Bind and Modulate the Orphan Nuclear Receptor Nurr1.

Paola Munoz-Tello, Hua Lin, Pasha Khan, Ian Mitchelle S de Vera, Theodore M Kamenecka, Douglas J Kojetin

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Journal of medicinal chemistry, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 36 papers.

0numbers the graph read from it
0cells of the map it votes in
36citing papers in PubMed
3.7field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

36 citing papers in PubMed, 65 citations in OpenAlex.

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  19. Exploring Fatty Acid Mimetics as NR4A Ligands.Journal of medicinal chemistry · 2023
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Paola Munoz-TelloDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida 33458, United States.
Hua LinDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, Florida 33458, United States.ORCID 0000-0002-0840-6553
Pasha KhanDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, Florida 33458, United States.
Ian Mitchelle S de VeraDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida 33458, United States.ORCID 0000-0003-4682-901X
Theodore M KameneckaDepartment of Molecular Medicine, The Scripps Research Institute, Jupiter, Florida 33458, United States.ORCID 0000-0002-3077-0167
Douglas J KojetinDepartment of Integrative Structural and Computational Biology, The Scripps Research Institute, Jupiter, Florida 33458, United States.ORCID 0000-0001-8058-6168
Scripps Research Institute · US

Funding

Structural mechanism and function of endogenous ligands targeting orphan NR4A receptorsR01GM114420 · NIGMS · SCRIPPS FLORIDA · PI KOJETIN, DOUGLAS · 2015 to 2018
$1.5M
Bruker Avance III HD 600 MHz NMR spectrometerS10OD021550 · OD · SCRIPPS FLORIDA · PI KOJETIN, DOUGLAS · 2017 to 2017
$600k
NIGMS NIH HHS R01 GM114420NIH HHS S10 OD021550
6 · The paper itself

Abstract

Nurr1/NR4A2 is an orphan nuclear receptor transcription factor implicated as a drug target for neurological disorders including Alzheimer's and Parkinson's diseases. Previous studies identified small-molecule NR4A nuclear receptor modulators, but it remains unclear if these ligands affect transcription via direct binding to Nurr1. We assessed 12 ligands reported to affect NR4A activity for Nurr1-dependent and Nurr1-independent transcriptional effects and the ability to bind the Nurr1 ligand-binding domain (LBD). Protein NMR structural footprinting data show that amodiaquine, chloroquine, and cytosporone B bind the Nurr1 LBD; ligands that do not bind include C-DIM12, celastrol, camptothecin, IP7e, isoalantolactone, ethyl 2-[2,3,4-trimethoxy-6-(1-octanoyl)phenyl]acetate (TMPA), and three high-throughput screening hit derivatives. Importantly, ligands that modulate Nurr1 transcription also show Nurr1-independent effects on transcription in a cell type-specific manner, indicating that care should be taken when interpreting the functional response of these ligands in transcriptional assays. These findings should help focus medicinal chemistry efforts that desire to optimize Nurr1-binding ligands.

Indexed as

LigandsAmodiaquineAnimalsCell LineChloroquineHumansNuclear Magnetic Resonance, BiomolecularNuclear Receptor Subfamily 4, Group A, Member 2PhenylacetatesProtein BindingRatsSmall Molecule LibrariesTranscription, GeneticAmodiaquineChloroquinecytosporone BLigandsNR4A2 protein, humanNuclear Receptor Subfamily 4, Group A, Member 2PhenylacetatesSmall Molecule Libraries

Identifiers

PMID33289551
PMCPMC8006468
OpenAlexW3111219662

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.