Evidence map›Paper›PMID 33289349›Full record

ArticleThe plant genome2020

Development of a dense genetic map and QTL analysis for pod borer Helicoverpa armigera (Hübner) resistance component traits in chickpea (Cicer arietinum L.).

Rutwik Barmukh, Manish Roorkiwal, Jagdish Jaba, Annapurna Chitikineni, Suraj Prasad Mishra, Someswar Rao Sagurthi, Rajendra Munghate, H C Sharma, Rajeev K Varshney

Open access · goldAbstract read
In one paragraph

Article in The plant genome, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.9field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 25 citations in OpenAlex.

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  6. Molecular mechanisms, genetic mapping, and genome editing for insect pest resistance in field crops.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2022
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Rutwik BarmukhCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.ORCID https://orcid.org/0000-0002-2740-8992
Manish RoorkiwalCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.ORCID https://orcid.org/0000-0001-6595-281X
Jagdish JabaTheme-Integrated Crop Management, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Annapurna ChitikineniCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Suraj Prasad MishraTheme-Integrated Crop Management, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Someswar Rao SagurthiDepartment of Genetics, Osmania University, Hyderabad, India.ORCID https://orcid.org/0000-0003-1939-0849
Rajendra MunghateTheme-Integrated Crop Management, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
H C SharmaTheme-Integrated Crop Management, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.
Rajeev K VarshneyCenter of Excellence in Genomics & Systems Biology, International Crops Research Institute for the Semi-Arid Tropics (ICRISAT), Hyderabad, India.ORCID https://orcid.org/0000-0002-4562-9131
International Crops Research Institute for the Semi-Arid Tropics · INOsmania University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genetic enhancement for resistance against the pod borer, Helicoverpa armigera is crucial for enhancing production and productivity of chickpea. Here we provide some novel insights into the genetic architecture of natural variation in H. armigera resistance in chickpea, an important legume, which plays a major role in food and nutritional security. An interspecific recombinant inbred line (RIL) population developed from a cross between H. armigera susceptible accession ICC 4958 (Cicer arietinum) and resistant accession PI 489777 (Cicer reticulatum) was evaluated for H. armigera resistance component traits using detached leaf assay and under field conditions. A high-throughput AxiomCicerSNP array was utilized to construct a dense linkage map comprising of 3,873 loci and spanning a distance of 949.27 cM. Comprehensive analyses of extensive genotyping and phenotyping data identified nine main-effect QTLs and 955 epistatic QTLs explaining up to 42.49% and 38.05% phenotypic variance, respectively, for H. armigera resistance component traits. The main-effect QTLs identified in this RIL population were linked with previously described genes, known to modulate resistance against lepidopteran insects in crop plants. One QTL cluster harbouring main-effect QTLs for three H. armigera resistance component traits and explaining up to 42.49% of the phenotypic variance, was identified on CaLG03. This genomic region, after validation, may be useful to improve H. armigera resistance component traits in elite chickpea cultivars.

Identifiers

PMID33289349
PMCPMC12807004
OpenAlexW3108408154

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.