Evidence map›Paper›PMID 33288718›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Geochemical transition zone powering microbial growth in subsurface sediments.

Rui Zhao, José M Mogollón, Sophie S Abby, Christa Schleper, Jennifer F Biddle, Desiree L Roerdink, Ingunn H Thorseth, Steffen L Jørgensen

Open access · hybridAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
5.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 51 citations in OpenAlex.

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  7. Diversification, niche adaptation, and evolution of a candidate phylum thriving in the deep Critical Zone.Proceedings of the National Academy of Sciences of the United States of America · 2025
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  16. "Applied and environmental microbiology · 2023
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  20. Occurrence, Diversity, and Genomes of "Applied and environmental microbiology · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 4 countries.

Rui ZhaoK.G. Jebsen Centre for Deep Sea Research, University of Bergen, 5007 Bergen, Norway; zhaorui087@gmail.com steffen.jorgensen@uib.no.
José M MogollónInstitute of Environmental Sciences (CML), Leiden University, 2333 CC Leiden, The Netherlands.ORCID 0000-0002-7110-5470
Sophie S AbbyDivision of Archaea Biology and Ecogenomics, Department of Functional and Evolutionary Ecology, University of Vienna, A-1090 Vienna, Austria.ORCID 0000-0002-5231-3346
Christa SchleperDivision of Archaea Biology and Ecogenomics, Department of Functional and Evolutionary Ecology, University of Vienna, A-1090 Vienna, Austria.ORCID 0000-0002-1918-2735
Jennifer F BiddleSchool of Marine Science and Policy, University of Delaware, Lewes, DE 19958.ORCID 0000-0002-4344-8724
Desiree L RoerdinkK.G. Jebsen Centre for Deep Sea Research, University of Bergen, 5007 Bergen, Norway.ORCID 0000-0002-1182-3606
Ingunn H ThorsethK.G. Jebsen Centre for Deep Sea Research, University of Bergen, 5007 Bergen, Norway.ORCID 0000-0003-3432-6968
Steffen L JørgensenK.G. Jebsen Centre for Deep Sea Research, University of Bergen, 5007 Bergen, Norway; zhaorui087@gmail.com steffen.jorgensen@uib.no.ORCID 0000-0003-0240-7907
University of Bergen · NOUniversity of Vienna · ATLeiden University · NLUniversity of Delaware · US

Funding

Predictive Modeling & Optimal Control Framework for Model-Based Epidemic Response in DelawareP20GM103446 · NIGMS · UNIVERSITY OF DELAWARE · PI MELINDA K DUNCAN · 2012 to 2026
$67.2M
NIGMS NIH HHS P20 GM103446
6 · The paper itself

Abstract

No other environment hosts as many microbial cells as the marine sedimentary biosphere. While the majority of these cells are expected to be alive, they are speculated to be persisting in a state of maintenance without net growth due to extreme starvation. Here, we report evidence for in situ growth of anaerobic ammonium-oxidizing (anammox) bacteria in ∼80,000-y-old subsurface sediments from the Arctic Mid-Ocean Ridge. The growth is confined to the nitrate-ammonium transition zone (NATZ), a widespread geochemical transition zone where most of the upward ammonium flux from deep anoxic sediments is being consumed. In this zone the anammox bacteria abundances, assessed by quantification of marker genes, consistently displayed a four order of magnitude increase relative to adjacent layers in four cores. This subsurface cell increase coincides with a markedly higher power supply driven mainly by intensified anammox reaction rates, thereby providing a quantitative link between microbial proliferation and energy availability. The reconstructed draft genome of the dominant anammox bacterium showed an index of replication (iRep) of 1.32, suggesting that 32% of this population was actively replicating. The genome belongs to a

Indexed as

Bacterial Physiological PhenomenaGenome, BacterialAmmonium CompoundsArctic RegionsBacteriaBiodiversityGeologic SedimentsNitratesNitrogenOceans and SeasAmmonium CompoundsNitratesNitrogenanammoxdeep biosphereenergy availabilitymicrobial in situ growthnitrogen cycle

Identifiers

PMID33288718
PMCPMC7768721
OpenAlexW3112226335

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.