Evidence map›Paper›PMID 33288712›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2020

Dissociating antibacterial from ototoxic effects of gentamicin C-subtypes.

Mary E O'Sullivan, Yohan Song, Robert Greenhouse, Randy Lin, Adela Perez, Patrick J Atkinson, Jacob P MacDonald, Zehra Siddiqui, Dennis Lagasca, Kate Comstock and 3 more

Erratum issuedOpen access · greenAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
3.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 56 citations in OpenAlex.

  1. Article
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  7. Glycodiversification of gentamicins throughActa pharmaceutica Sinica. B · 2024
    Article
  8. Article
  9. Article
  10. In vitro susceptibility of Neisseria gonorrhoeae to netilmicin and etimicin in comparison to gentamicin and other aminoglycosides.European journal of clinical microbiology & infectious diseases : official publication of the European Society of Clinical Microbiology · 2024
    Article
  11. Comparative Pharmacokinetics of Gentamicin CAntibiotics (Basel, Switzerland) · 2024
    Article
  12. Article
  13. Review
  14. Article
  15. Article
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  17. Article
  18. Review
  19. Identifying targets to prevent aminoglycoside ototoxicity.Molecular and cellular neurosciences · 2022
    Review
  20. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors at 4 institutions in 2 countries.

Mary E O'SullivanDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305.ORCID 0000-0002-8700-6047
Yohan SongDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305.
Robert GreenhouseDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305.
Randy LinDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305.
Adela PerezDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305.
Patrick J AtkinsonDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305.
Jacob P MacDonaldNanosyn Inc., Santa Clara, CA 95051.
Zehra SiddiquiNanosyn Inc., Santa Clara, CA 95051.
Dennis LagascaNanosyn Inc., Santa Clara, CA 95051.
Kate ComstockThermo Fisher Scientific, San Jose, CA 95134.
Markus E HuthDepartment of Otorhinolaryngology, Head, and Neck Surgery, Inselspital, Bern University Hospital, University of Bern, 3012 Bern, Switzerland.ORCID 0000-0002-2156-3158
Alan G ChengDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305; aglcheng@stanford.edu aricci@stanford.edu.ORCID 0000-0002-4702-8401
Anthony J RicciDepartment of Otolaryngology-Head and Neck Surgery, Stanford University School of Medicine, Stanford, CA 94305; aglcheng@stanford.edu aricci@stanford.edu.ORCID 0000-0002-1706-8904
Stanford University · USNanosyn (United States) · USThermo Fisher Scientific (United States) · USUniversity of Bern · CH

Funding

Designing new aminoglycosides to alleviate inner ear toxicityR01DC014720 · NIDCD · STANFORD UNIVERSITY · PI CHENG, ALAN GI-LUN, RICCI, ANTHONY J · 2016 to 2020
$3.0M
NIDCD NIH HHS R01 DC014720
6 · The paper itself

Abstract

Gentamicin is a potent broad-spectrum aminoglycoside antibiotic whose use is hampered by ototoxic side-effects. Hospital gentamicin is a mixture of five gentamicin C-subtypes and several impurities of various ranges of nonexact concentrations. We developed a purification strategy enabling assaying of individual C-subtypes and impurities for ototoxicity and antimicrobial activity. We found that C-subtypes displayed broad and potent in vitro antimicrobial activities comparable to the hospital gentamicin mixture. In contrast, they showed different degrees of ototoxicity in cochlear explants, with gentamicin C2b being the least and gentamicin C2 the most ototoxic. Structure-activity relationships identified sites in the C4'-C6' region on ring I that reduced ototoxicity while preserving antimicrobial activity, thus identifying targets for future drug design and mechanisms for hair cell toxicity. Structure-activity relationship data suggested and electrophysiological data showed that the C-subtypes both bind and permeate the hair cell mechanotransducer channel, with the stronger the binding the less ototoxic the compound. Finally, both individual and reformulated mixtures of C-subtypes demonstrated decreased ototoxicity while maintaining antimicrobial activity, thereby serving as a proof-of-concept of drug reformulation to minimizing ototoxicity of gentamicin in patients.

Indexed as

AnimalsAnti-Bacterial AgentsCochleaDrug ContaminationGentamicinsHair Cells, AuditoryHospitalsIon ChannelsMechanotransduction, CellularMicrobial Sensitivity TestsRats, Sprague-DawleySisomicinStructure-Activity RelationshipAnti-Bacterial Agentsgentamicin CGentamicinsIon ChannelsSisomicinaminoglycosidegentamicinhair cellmechanotransducer channelototoxicity

Identifiers

PMID33288712
PMCPMC7768767
OpenAlexW3112077480

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.