Evidence map›Paper›PMID 33287141›Full record

ArticleBiosensors2020

An Improved HRPE-Based Transcriptional Output Reporter to Detect Hypoxia and Anoxia in Plant Tissue.

Gabriele Panicucci, Sergio Iacopino, Elisa De Meo, Pierdomenico Perata, Daan A Weits

Open access · goldAbstract read
In one paragraph

Article in Biosensors, 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
2.8field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
  2. HNature · 2026
    Article
  3. A synthetic ERFVII-dependent circuit in yeast sheds light on the regulation of early hypoxic responses of plants.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Article
  8. Article
  9. Genetically Encoded Reporters to Monitor Hypoxia.Methods in molecular biology (Clifton, N.J.) · 2024
    Article
  10. Review
  11. Target of rapamycin signaling couples energy to oxygen sensing to modulate hypoxic gene expression inProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  12. Article
  13. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

Gabriele PanicucciBiology Department, University of Pisa, 56126 Pisa, Italy.
Sergio IacopinoBiology Department, University of Pisa, 56126 Pisa, Italy.
Elisa De MeoDepartment of Pharmacy and Biotechnology, University of Bologna, 40126 Bologna, Italy.
Pierdomenico PerataInstitute of Life Sciences, Scuola Superiore Sant'Anna, 56127 Pisa, Italy.
Daan A WeitsInstitute of Life Sciences, Scuola Superiore Sant'Anna, 56127 Pisa, Italy.ORCID 0000-0003-4423-5568
Scuola Superiore Sant'Anna · ITUniversity of Pisa · ITUniversity of Bologna · IT

Funding

Italian Ministry of Education University and Research Grant (PRIN) 20173EWRT9
6 · The paper itself

Abstract

Oxygen levels in plant tissues may vary, depending on metabolism, diffusion barriers, and environmental availability. Current techniques to assess the oxic status of plant cells rely primarily on invasive microoptodes or Clark-type electrodes, which are not optimally suited for experiments that require high spatial and temporal resolution. In this case, a genetically encoded oxygen biosensor is required instead. This article reports the design, test, and optimization of a hypoxia-signaling reporter, based on five-time repeated hypoxia-responsive promoter elements (HRPE) driving the expression of different reporter proteins. Specifically, this study aimed to improve its performance as a reporter of hypoxic conditions by testing the effect of different untranslated regions (UTRs) at the 5' end of the reporter coding sequence. Next, we characterized an optimized version of the

Indexed as

Biosensing TechniquesPlant Physiological PhenomenaHypoxiaLuminescent ProteinsOxygenPlant DiseasesPromoter Regions, GeneticSignal TransductionLuminescent ProteinsOxygenanoxiabiosensorERF-VIIfluorescenceHRPEhypoxiaoxygenplantsreporterUnaG

Identifiers

PMID33287141
PMCPMC7761731
OpenAlexW3110415240

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.