Evidence map›Paper›PMID 33286853›Full record

ArticleEntropy (Basel, Switzerland)2020

Upscaling Statistical Patterns from Reduced Storage in Social and Life Science Big Datasets.

Stefano Garlaschi, Anna Fochesato, Anna Tovo

Abstract read
In one paragraph

Article in Entropy (Basel, Switzerland), 2020. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Stefano GarlaschiDipartimento di Fisica e Astronomia "Galileo Galilei", Università degli studi di Padova, Via Marzolo 8, 35131 Padova, Italy.ORCID 0000-0001-6984-7750
Anna FochesatoFondazione The Microsoft Research-University of Trento, Centre for Computational and Systems Biology (COSBI), Piazza Manifattura 1, 38068 Rovereto, Italy.
Anna TovoDipartimento di Fisica e Astronomia "Galileo Galilei", Università degli studi di Padova, Via Marzolo 8, 35131 Padova, Italy.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent technological and computational advances have enabled the collection of data at an unprecedented rate. On the one hand, the large amount of data suddenly available has opened up new opportunities for new data-driven research but, on the other hand, it has brought into light new obstacles and challenges related to storage and analysis limits. Here, we strengthen an upscaling approach borrowed from theoretical ecology that allows us to infer with small errors relevant patterns of a dataset in its entirety, although only a limited fraction of it has been analysed. In particular we show that, after reducing the input amount of information on the system under study, by applying our framework it is still possible to recover two statistical patterns of interest of the entire dataset. Tested against big ecological, human activity and genomics data, our framework was successful in the reconstruction of global statistics related to both the number of types and their abundances while starting from limited presence/absence information on small random samples of the datasets. These results pave the way for future applications of our procedure in different life science contexts, from social activities to natural ecosystems.

Indexed as

big data storage reductionstatistical patterns inferenceupscaling life science data

Identifiers

PMID33286853
PMCPMC7597173

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.